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BaseInfo

ncRNA ID novel_zma_miR1715
Species Zea mays
Class miRNA
Genome position Chr10:44406349-44406430 [+]
Reference genome RefGen_v4
Source SRR2089711;SRR1997866
Length 22
Mature sequence(if miRNA) 61 - CAAGCUGUGCUCGAUGAUGGAU - 82
Stem-loop(if miRNA) C   -     -  -   U    C   GC  CUGUU       U
 UUC UCAUC AG ACA UUUG GGA  CG     UUUUCGG C
 ||| ||||| || ||| |||| |||  ||     ||||||| U
 AGG AGUAG UC UGU GAAC CCU  GC     GGAAGCC C
U   U     C  G   C    -   UA  ---UU       A
Stem-loop sequence CUUCUCAUCAGACAUUUUGCGGAGCCGCUGUUUUUUCGGUCUCACCGAAGGUUCGAUUCCCAAGCUGUGCUCGAUGAUGGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU940885.1
ncRNA:22   UAGGUAGUAGCUCGUGUCGAAC   1
  ||||||*||=||||||||||||
targets:427   AUCCAUAAUUGAGCACAGCUUG   448

2.5 Zea mays clone 1166220 mRNA sequence NA coding protein psRNATarget