ncRNA ID | novel_zma_miR1713 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:7292755-7292831 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089711;SRR2287031;SRR2287159;SRR2287160;SRR2287161;SRR2287162;SRR2287164;SRR2287165;SRR5451003;SRR5451004;SRR5451005;SRR5451006;SRR2089698;SRR2089699;SRR2089700;SRR2089701;SRR2089702;SRR2089703;SRR2089704;SRR2089705;SRR2089706;SRR2089707;SRR2089708 |
Length | 24 |
Mature sequence(if miRNA) | 54 - GUUAAAGAGUAGAAUAGAGCGGAU - 77 |
Stem-loop(if miRNA) |
---             G     -          --C   A    CGUUCUAUUCUAU UUUUG CCAAAUAGAA   AGA U    ||||||||||||| ||||| ||||||||||   ||| C    GCGAGAUAAGAUG GAAAU GGUUUGUUUU   UCU A UAG             A     U          UUA   C |
Stem-loop sequence | CGUUCUAUUCUAUGUUUUGCCAAAUAGAACAGAAUCACUCUAUUUUUUGUUUGGUUAAAGAGUAGAAUAGAGCGGAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU945197.1 |
|
1.5 | Zea mays clone 244184 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
BT084215.2 |
|
1.5 | Zea mays full-length cDNA clone ZM_BFb0090B20 mRNA, complete cds | NA | coding protein | psRNATarget |