| ncRNA ID | osa-miR5078 |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr5:21907862-21908296 [-] |
| Reference genome | MSU7 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 11 - CCUCGUUCGACCGUGGCAUUU - 31 |
| Stem-loop(if miRNA) |
A A CUA UA U U AACACCUGCCAA CCUCCAUGUCAUGUCGUCGUCCCAUGGCAGAGCGCUCCAACCUGGCGCAUCCGAUGAAGUAGCCGUCGCUGCAUAUGCAUUGGUUACAGCAGCACCAGCACUACAGGAUGCCAUCGCC GGCU C AUAAAAUGCCACGG AA GGGGGUGUUCGCUAGAAUGUCAUCGUGGACGGUAUU CCCUUGGAUCUUCU CUUCCUCC UUC G |||| | |||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||| C CCGA G UAUUUUACGGUGCC UU UCCCCACAAGCGAUCUUACGGUAGUACCUGUUAUAA GGGAACCUAGAAGA GAAGGAGG CUG C A A AGC GC C - ---------GAG CAACCCACGACCAGUAAGGGGAGGUACAGUACGGUAGCAACCGAGGUCGUCGUCGAGUACUACGGGUGGUGGUCACGGACUGACGGUUCUGUUCCUCGAGACGAAGUGUAAGCACGAG |
| Stem-loop sequence | GGCUACAAUAAAAUGCCACGGCUAAAUAGGGGGUGUUCGCUAGAAUGUCAUCGUGGACGGUAUUUCCCUUGGAUCUUCUUCUUCCUCCAACACCUGCCAAUUCCCUCCAUGUCAUGUCGUCGUCCCAUGGCAGAGCGCUCCAACCUGGCGCAUCCGAUGAAGUAGCCGUCGCUGCAUAUGCAUUGGUUACAGCAGCACCAGCACUACAGGAUGCCAUCGCCGCCGAGCACGAAUGUGAAGCAGAGCUCCUUGUCUUGGCAGUCAGGCACUGGUGGUGGGCAUCAUGAGCUGCUGCUGGAGCCAACGAUGGCAUGACAUGGAGGGGAAUGACCAGCACCCAACGUCGAGGGAGGAAGAGAAGAUCCAAGGGCAAUAUUGUCCAUGAUGGCAUUCUAGCGAACACCCCUCGUUCGACCGUGGCAUUUUAUAGAAGCC |
| 1 | PMID:21352554
"Discovery of barley miRNAs through deep sequencing of short reads"; Schreiber AW, Shi BJ, Huang CY, Langridge P, Baumann U; BMC Genomics. 12:129(2011). |