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BaseInfo

ncRNA ID	novel_zma_miR1703
Species	Zea mays
Class	miRNA
Genome position	Chr3:197096300-197096432 [-]
Reference genome	RefGen_v4
Source	SRR1583944
Length	24
Mature sequence(if miRNA)	1 - AACUACAUAUAGAUUAUAAUAUGU - 24
Stem-loop(if miRNA)	--               C                          CAAAAG        UCAUAAAAAG   AUAUUAUAAUCUAUA GUAGUUGUUUGGUAGUCUAGAUUAUA      UAGAUUAU          A   ||||||||||||||| ||||||||||||||||||||||||||      ||||||||   UAUAAUAUUAGAUAU CAUCAACAAACCAUCAGAUCUAAUAU      AUUUAAUA          C UG               A                          ---UAG        UAUUAGACAA
Stem-loop sequence	AUAUUAUAAUCUAUACGUAGUUGUUUGGUAGUCUAGAUUAUACAAAAGUAGAUUAUUCAUAAAAAGACAACAGAUUAUAUAAUUUAGAUUAUAAUCUAGACUACCAAACAACUACAUAUAGAUUAUAAUAUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008662509.2	ncRNA:24   UGUAUAAUAUUAGAUAUACAUCAA   1   |=|||||||||||||||||||||| targets:2493   AUAUAUUAUAAUCUAUAUGUAGUU   2516 Target Full Sequence	0.0	PREDICTED: Zea mays L-type lectin-domain containing receptor kinase IX.1 (LOC103639802), mRNA	NA	coding protein	psRNATarget
XM_008676585.2	ncRNA:24   UGUAUAAUAUUAGAUAUACAUCAA   1   |=|||||||||||||||||||||| targets:1906   AUAUAUUAUAAUCUAUAUGUAGUU   1929 Target Full Sequence	0.0	PREDICTED: Zea mays GABA transporter 1 (LOC103650987), mRNA	NA	coding protein	psRNATarget
BT043160.1	ncRNA:24   UGUAUAAUAUUAGAUAUACAUCAA   1   |=|||||||||||||||||||||| targets:1258   AUAUAUUAUAAUCUAUAUGUAGUU   1281 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFc0114D22 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001148840.1	ncRNA:24   UGUAUAAUAUUAGAUAUACAUCAA   1   |=|||||||||||||||||||||| targets:1258   AUAUAUUAUAAUCUAUAUGUAGUU   1281 Target Full Sequence	0.0	Zea mays uncharacterized LOC100274481 (LOC100274481), mRNA	NA	coding protein	psRNATarget
XM_008661569.2	ncRNA:24   UGUAUAAUAUUAGAUAUACAUCAA   1   |||||||||||||||*|||||||| targets:1803   ACAUAUUAUAAUCUACAUGUAGUU   1826 Target Full Sequence	1.5	PREDICTED: Zea mays premnaspirodiene oxygenase (LOC103638736), mRNA	NA	coding protein	psRNATarget
XM_008651828.2	ncRNA:24   UGUAUAAUAUUAGAUAUACAUCAA   1   |=||||||||||||||||*||||| targets:22   AUAUAUUAUAAUCUAUAUAUAGUU   45 Target Full Sequence	1.5	PREDICTED: Zea mays pentatricopeptide repeat-containing protein At1g15510, chloroplastic (LOC103630763), mRNA	NA	coding protein	psRNATarget
BT084858.1	ncRNA:24   UGUAUAAUAUUAGAUAUACAUCAA   1   **|*=||*||=||||||||||||| targets:377   UGAAGUUUUAGUCUAUAUGUAGUU   400 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0194E22 mRNA, complete cds	NA	coding protein	psRNATarget