ncRNA ID | osa-miR1852 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr5:20761025-20761159 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 103 - AUAUGGAUUCAGAAUGCAGGU - 123 |
Stem-loop(if miRNA) |
UA   U      C         A                   AAAUUGA      UGCACGGUAGU   GAC AACUAC CCUGCAUUC GAAUUCAUAUAGCGAUUGA       ACUCCG           A   ||| |||||| ||||||||| |||||||||||||||||||       ||||||           G   UUG UUGAUG GGACGUAAG CUUAGGUAUAUCGUUAACU       GUUAUC           U AC   U      U         A                   AAUCUUU      UAGACUGAUGA |
Stem-loop sequence | UAGACUAACUACCCCUGCAUUCAGAAUUCAUAUAGCGAUUGAAAAUUGAACUCCGUGCACGGUAGUAGUAGUAGUCAGAUCUAUUGUUUCUAAUCAAUUGCUAUAUGGAUUCAGAAUGCAGGUGUAGUUUGUUCA |
1 | PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains"; Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C; Genome Res. 18:1456-1465(2008). |