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BaseInfo

ncRNA ID osa-miR1852
Species Oryza sativa
Class miRNA
Genome position Chr5:20761025-20761159 [+]
Reference genome MSU7
Source miRBase
Length 21
Mature sequence(if miRNA) 103 - AUAUGGAUUCAGAAUGCAGGU - 123
Stem-loop(if miRNA) UA   U      C         A                   AAAUUGA      UGCACGGUAGU
  GAC AACUAC CCUGCAUUC GAAUUCAUAUAGCGAUUGA       ACUCCG           A
  ||| |||||| ||||||||| |||||||||||||||||||       ||||||           G
  UUG UUGAUG GGACGUAAG CUUAGGUAUAUCGUUAACU       GUUAUC           U
AC   U      U         A                   AAUCUUU      UAGACUGAUGA
Stem-loop sequence UAGACUAACUACCCCUGCAUUCAGAAUUCAUAUAGCGAUUGAAAAUUGAACUCCGUGCACGGUAGUAGUAGUAGUCAGAUCUAUUGUUUCUAAUCAAUUGCUAUAUGGAUUCAGAAUGCAGGUGUAGUUUGUUCA

Reference

1 PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains";
Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C;
Genome Res. 18:1456-1465(2008).