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BaseInfo

ncRNA ID osa-miR1861g
Species Oryza sativa
Class miRNA
Genome position Chr5:18668611-18668717 [+]
Reference genome MSU7
Source miRBase
Length 22
Mature sequence(if miRNA) 23 - CAGUCUUGUGGCAAGAACUGAG - 44
Stem-loop(if miRNA) -   UG          U     C A                 GA     UC U
 CGG  UUGCAUAUUC UAGGC C GUCUUGUGGCAAGAACU  GUAGU  G U
 |||  |||||||||| ||||| | |||||||||||||||||  |||||  |
 GUU  AACGUAUAAG GUCCG G UAGAACACUGUUCUUGG  CAUCG  C A
G   GA          U     A C                 UG     CU A
Stem-loop sequence CGGUGUUGCAUAUUCUUAGGCCCAGUCUUGUGGCAAGAACUGAGUAGUUCGUUAACUCGCUACGUGGUUCUUGUCACAAGAUCGAGCCUGUGAAUAUGCAAAGUUGG

Reference

1 PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains";
Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C;
Genome Res. 18:1456-1465(2008).