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BaseInfo

ncRNA ID novel_zma_miR1680
Species Zea mays
Class miRNA
Genome position Chr4:192425842-192426002 [-]
Reference genome RefGen_v4
Source SRR2089711;SRR2287163;SRR5099742
Length 24
Mature sequence(if miRNA) 138 - AUUGGUGCCCUCAGUUUUGGUGGU - 161
Stem-loop(if miRNA) --                           C   C  A                          C          CA  GCU
  AUUGGUGCCCUCAGUUUUGGUGGUGUG UCA CU UACCCUUAGUCGUGUUUUUUGCUCAG UGUGCCCUUC  GU   A
  ||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||| ||||||||||  ||
  UAACCACGGGAGUCAAAACCACCACAC AGU GA AUGGGAAUCAGCACAAAAAACGAGUC ACACGGGGAG  CA   U
UU                           A   C  G                          A          -A  AGA
Stem-loop sequence AUUGGUGCCCUCAGUUUUGGUGGUGUGCUCACCUAUACCCUUAGUCGUGUUUUUUGCUCAGCUGUGCCCUUCCAGUGCUAUAGAACAGAGGGGCACAACUGAGCAAAAAACACGACUAAGGGUAGAGCUGAACACACCACCAAAACUGAGGGCACCAAUUU