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BaseInfo

ncRNA ID osa-miR1861f
Species Oryza sativa
Class miRNA
Genome position Chr5:18668398-18668513 [+]
Reference genome MSU7
Source miRBase
Length 22
Mature sequence(if miRNA) 17 - CGAUCUUGAGGCAGGAACUGAG - 38
Stem-loop(if miRNA) U CG     U     C        A                 U U     UU  UCU
 G  UAUUC UAGGC CGAUCUUG GGCAGGAACUGAGUAGU G UGAAC  GC   A
 |  ||||| ||||| |||||||| ||||||||||||||||| | |||||  ||
 C  AUAAG AUCUG GCUAGAAC CUGUCCUUGGCUUAUCA C ACUUG  UG   U
A AU     U     A        C                 C C     CU  UUG
Stem-loop sequence UGCGUAUUCUUAGGCCCGAUCUUGAGGCAGGAACUGAGUAGUUGUUGAACUUGCUCUAUGUUGUUCGUUCACCCACUAUUCGGUUCCUGUCCCAAGAUCGAGUCUAUGAAUAUACA

Reference

1 PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains";
Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C;
Genome Res. 18:1456-1465(2008).