ncRNA ID | osa-miR1861f |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr5:18668398-18668513 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 22 |
Mature sequence(if miRNA) | 17 - CGAUCUUGAGGCAGGAACUGAG - 38 |
Stem-loop(if miRNA) |
U CG     U     C        A                 U U     UU  UCU  G  UAUUC UAGGC CGAUCUUG GGCAGGAACUGAGUAGU G UGAAC  GC   A  |  ||||| ||||| |||||||| ||||||||||||||||| | |||||  ||  C  AUAAG AUCUG GCUAGAAC CUGUCCUUGGCUUAUCA C ACUUG  UG   U A AU     U     A        C                 C C     CU  UUG |
Stem-loop sequence | UGCGUAUUCUUAGGCCCGAUCUUGAGGCAGGAACUGAGUAGUUGUUGAACUUGCUCUAUGUUGUUCGUUCACCCACUAUUCGGUUCCUGUCCCAAGAUCGAGUCUAUGAAUAUACA |
1 | PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains"; Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C; Genome Res. 18:1456-1465(2008). |