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BaseInfo

ncRNA ID novel_zma_miR1678
Species Zea mays
Class miRNA
Genome position Chr4:195570606-195570659 [-]
Reference genome RefGen_v4
Source SRR2089711;SRR2089713;SRR2089715;SRR2089699;SRR2089706;SRR2089707
Length 22
Mature sequence(if miRNA) 33 - GAGGAUUAGGACAUAUUGCAAG - 54
Stem-loop(if miRNA) --      UA   CA       AGAAAU
  GAGGAU  GGA  UAUUGCA      U
  ||||||  |||  |||||||
  CUUCUA  CCU  AUGACGU      G
AU      --   AG       AAGAAC
Stem-loop sequence GAGGAUUAGGACAUAUUGCAAGAAAUUGCAAGAAUGCAGUAGAUCCAUCUUCUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU944488.1
ncRNA:22   GAACGUUAUACAGGAUUAGGAG   1
  |||||||||||||*|||||||=
targets:428   CUUGCAAUAUGUCAUAAUCCUU   449

2.5 Zea mays clone 220307 mRNA sequence NA coding protein psRNATarget