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BaseInfo

ncRNA ID novel_zma_miR1667
Species Zea mays
Class miRNA
Genome position Chr4:239817027-239817248 [-]
Reference genome RefGen_v4
Source SRR2089711;SRR2089715
Length 24
Mature sequence(if miRNA) 199 - AGCUCUUGGACACUAGAAAUGGUA - 222
Stem-loop(if miRNA) --    C         A              U                    CA  AG          C       AA  A    A  -AA    U     A  A   U  U
  AGCU UUGGACACU GAAAUGGUACUAUU AUCAGGAACACACUGAGAAA  UU  UUAUUAUCAG GGCACAC  CA CGGU AA   UUUC AUUUU GA AAA CU A
  |||| ||||||||| |||||||||||||| ||||||||||||||||||||  ||  |||||||||| |||||||  || |||| ||   |||| ||||| || ||| || C
  UCGA AACCUGUGA CUUUACCAUGAUAA UAGUCCUUGUGUGACUCUUU  AA  AGUAAUAGUC CUGUGUG  GU GCUA UU   AAAG UAAAG CU UUU GA A
AA    A         C              -                    AC  CA          C       GC  C    A  GAA    -     G  A   U  A
Stem-loop sequence AGCUCUUGGACACUAGAAAUGGUACUAUUUAUCAGGAACACACUGAGAAACAUUAGUUAUUAUCAGCGGCACACAACAACGGUAAAAAUUUCUAUUUUAGAAAAAUCUUACAAAGUUUUAUCGGAAAUGAAAAAGUUAAUCGCUGCGGUGUGUCCCUGAUAAUGAACAACAUUUCUCAGUGUGUUCCUGAUAAUAGUACCAUUUCCAGUGUCCAAAAGCUAA