ncRNA ID | novel_zma_miR1667 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:239817027-239817248 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089711;SRR2089715 |
Length | 24 |
Mature sequence(if miRNA) | 199 - AGCUCUUGGACACUAGAAAUGGUA - 222 |
Stem-loop(if miRNA) |
--    C         A              U                    CA  AG          C       AA  A    A  -AA    U     A  A   U  U   AGCU UUGGACACU GAAAUGGUACUAUU AUCAGGAACACACUGAGAAA  UU  UUAUUAUCAG GGCACAC  CA CGGU AA   UUUC AUUUU GA AAA CU A   |||| ||||||||| |||||||||||||| ||||||||||||||||||||  ||  |||||||||| |||||||  || |||| ||   |||| ||||| || ||| || C   UCGA AACCUGUGA CUUUACCAUGAUAA UAGUCCUUGUGUGACUCUUU  AA  AGUAAUAGUC CUGUGUG  GU GCUA UU   AAAG UAAAG CU UUU GA A AA    A         C              -                    AC  CA          C       GC  C    A  GAA    -     G  A   U  A |
Stem-loop sequence | AGCUCUUGGACACUAGAAAUGGUACUAUUUAUCAGGAACACACUGAGAAACAUUAGUUAUUAUCAGCGGCACACAACAACGGUAAAAAUUUCUAUUUUAGAAAAAUCUUACAAAGUUUUAUCGGAAAUGAAAAAGUUAAUCGCUGCGGUGUGUCCCUGAUAAUGAACAACAUUUCUCAGUGUGUUCCUGAUAAUAGUACCAUUUCCAGUGUCCAAAAGCUAA |