Search result

BaseInfo

ncRNA ID	novel_zma_miR1656
Species	Zea mays
Class	miRNA
Genome position	Chr3:211469466-211469591 [-]
Reference genome	RefGen_v4
Source	SRR1583944
Length	22
Mature sequence(if miRNA)	105 - UCUCCUAGUUUAUAUAAGUUGG - 126
Stem-loop(if miRNA)	--                                                            G   UCUCCUAGUUUAUAUAAGUUGGAUUAUGGUGAAAGGGUAGGAGGGUAAAAUAUCACUUUG A   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   GGAGGAUCAAAUAUAUUCAACCUAAUACCACUUUCCCAUCCUCCCAUUUUAUAGUGAAAC C AG                                                            C
Stem-loop sequence	UCUCCUAGUUUAUAUAAGUUGGAUUAUGGUGAAAGGGUAGGAGGGUAAAAUAUCACUUUGGACCCAAAGUGAUAUUUUACCCUCCUACCCUUUCACCAUAAUCCAACUUAUAUAAACUAGGAGGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU975471.1	ncRNA:22   GGUUGAAUAUAUUUGAUCCUCU   1   |||||||||||||*|||||||= targets:821   CCAACUUAUAUAAUCUAGGAGG   842 Target Full Sequence	2.5	Zea mays clone 490696 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_020547825.1	ncRNA:22   GGUUGAAUAUAUUUGAUCCUCU   1   =*|=||||||*||||||||||| targets:941   UAAGCUUAUACAAACUAGGAGA   962 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100304380 (pco129049), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020547824.1	ncRNA:22   GGUUGAAUAUAUUUGAUCCUCU   1   =*|=||||||*||||||||||| targets:859   UAAGCUUAUACAAACUAGGAGA   880 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100304380 (pco129049), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU947450.1	ncRNA:22   GGUUGAAUAUAUUUGAUCCUCU   1   =*|=||||||*||||||||||| targets:307   UAAGCUUAUACAAACUAGGAGA   328 Target Full Sequence	2.5	Zea mays clone 343584 mRNA sequence	NA	coding protein	psRNATarget