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BaseInfo

ncRNA ID	novel_zma_miR1650
Species	Zea mays
Class	miRNA
Genome position	Chr10:26527201-26527253 [-]
Reference genome	RefGen_v4
Source	SRR2089711;SRR2089714;SRR1997865;SRR5451005;SRR5451006
Length	24
Mature sequence(if miRNA)	1 - ACCGUCCUGUAGUUGAAUAGGCUC - 24
Stem-loop(if miRNA)	--  AGU    UG      A      U   GC   UGUU  ACUACA GAUGGU G   ||   ||||  |||||| |||||| A   CG   AUAA  UGAUGU CUGCCA G CU  --G    GU      C      A
Stem-loop sequence	GCAGUUGUUUGACUACAAGAUGGUUGAGAACCGUCCUGUAGUUGAAUAGGCUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT041698.1	ncRNA:24   CUCGGAUAAGUUGAUGUCCUGCCA   1   ***|=|||*||||||*|||||||| targets:390   ACACUUAUCCAACUAAAGGACGGU   413 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0033K21 mRNA, complete cds	NA	coding protein	psRNATarget
BT069622.1	ncRNA:24   CUCGGAUAAGUUGAUGUCCUGCCA   1   ***|=|||*||||||*|||||||| targets:1081   ACACUUAUCCAACUAAAGGACGGU   1104 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0192F21 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001148128.1	ncRNA:24   CUCGGAUAAGUUGAUGUCCUGCCA   1   ***|=|||*||||||*|||||||| targets:1081   ACACUUAUCCAACUAAAGGACGGU   1104 Target Full Sequence	2.5	Zea mays putative regulator of chromosome condensation (RCC1) family protein (LOC100273718), mRNA	NA	coding protein	psRNATarget
XM_008656377.2	ncRNA:24   CUCGGAUAAGUUGAUGUCCUGCCA   1   ***|=|||*||||||*|||||||| targets:3389   ACACUUAUCCAACUAAAGGACGGU   3412 Target Full Sequence	2.5	PREDICTED: Zea mays putative regulator of chromosome condensation (RCC1) family protein (LOC100273718), transcript variant X1, mRNA	NA	coding protein	psRNATarget