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BaseInfo

ncRNA ID	novel_zma_miR1648
Species	Zea mays
Class	miRNA
Genome position	Chr3:234780412-234780468 [-]
Reference genome	RefGen_v4
Source	SRR1583944
Length	22
Mature sequence(if miRNA)	36 - AAAUAAGGUUAUUUUCGGCGGU - 57
Stem-loop(if miRNA)	--                      CGCC   AAAUAAGGUUAUUUUCGGCGGU    A   ||||||||||||||||||||||    A   UUUAUUCCAAUAAAAGCUGCCG    C CU                      AUUC
Stem-loop sequence	AAAUAAGGUUAUUUUCGGCGGUCGCCAACCUUAGCCGUCGAAAAUAACCUUAUUUUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT017995.1	ncRNA:22   UGGCGGCUUUUAUUGGAAUAAA   1   *||*|=|||||||||||||||* targets:839   CCCCCUGAAAAUAACCUUAUUG   860 Target Full Sequence	3.0	Zea mays clone EL01N0526D08.c mRNA sequence	NA	coding protein	psRNATarget
BT085515.1	ncRNA:22   UG-GCGGCUUUUAUUGGAAUAAA   1   ||-=|=||||||||||*|||||| targets:1152   ACGUGUCGAAAAUAACAUUAUUU   1174 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0028G11 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008657284.2	ncRNA:22   UGGCGGCUUUUAUUGGAAUAAA   1   |=*||*||*||||||||||||| targets:1276   AUAGCAGACAAUAACCUUAUUU   1297 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103634691 (LOC103634691), mRNA	NA	coding protein	psRNATarget