ncRNA ID | novel_zma_miR1635 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr10:88712113-88712223 [-] |
Reference genome | RefGen_v4 |
Source | SRR1583944 |
Length | 24 |
Mature sequence(if miRNA) | 88 - CGGGGCUUCCUGUAGUUAAACAGA - 111 |
Stem-loop(if miRNA) |
--C              U              A A    AA  AA G ---A    A    GGGGCUUCCUGUAG UAAACAGAGCCCAG G UCUA  UA  U U    CUAU U    |||||||||||||| |||||||||||||| | ||||  ||  | |    ||||    CCCCGAAGGACAUC AUUUGUCUCGGGUU C AGAU  AU  A A    GAUA A CAA              C              C G    AG  AG G GAGA    U |
Stem-loop sequence | CGGGGCUUCCUGUAGUUAAACAGAGCCCAGAGAUCUAAAUAAAUGUACUAUAUAUAUAGAGAGAGAGAUAGAUAGAGCCUUGGGCUCUGUUUACCUACAGGAAGCCCCAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020541004.1 |
|
1.0 | PREDICTED: Zea mays uncharacterized LOC109940773 (LOC109940773), transcript variant X3, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_020541002.1 |
|
1.0 | PREDICTED: Zea mays uncharacterized LOC109940773 (LOC109940773), transcript variant X1, mRNA | NA | coding protein | psRNATarget |