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BaseInfo

ncRNA ID	novel_zma_miR1629
Species	Zea mays
Class	miRNA
Genome position	Chr3:219359547-219359609 [+]
Reference genome	RefGen_v4
Source	SRR1583944
Length	24
Mature sequence(if miRNA)	40 - AGCUGACUCGUUAAGCUAACGAGC - 63
Stem-loop(if miRNA)	--      A   -      CU       -   G   UCGUUA GCU AAUGAG  GGCUCGA UUC A   |||||| ||| ||||||  ||||||| |||   AGCAAU CGA UUGCUC  UCGAGCU GAG C CG      -   A      AG       U   U
Stem-loop sequence	UCGUUAAGCUAAUGAGCUGGCUCGAUUCGACUGAGUUCGAGCUGACUCGUUAAGCUAACGAGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI403438.1	ncRNA:24   CGAGCAAUCGAAUUGCUCAGUCGA   1   |||||||||||||||||||||||| targets:15   GCUCGUUAGCUUAACGAGUCAGCU   38 Target Full Sequence	0.0	Sequence 1563 from Patent EP2074227	NA	coding protein	psRNATarget
HI403438.1	ncRNA:24   CGAGCAAUCGAAUUGCUCAGUCGA   1   ||||*||||||||||||||||*|| targets:61   GCUCAUUAGCUUAACGAGUCAACU   84 Target Full Sequence	1.5	Sequence 1563 from Patent EP2074227	NA	coding protein	psRNATarget
JB163899.1	ncRNA:24   CGAGCAAUCGAAUUGCUCAGUCGA   1   |||||||||||||||||||||||| targets:15   GCUCGUUAGCUUAACGAGUCAGCU   38 Target Full Sequence	0.0	Sequence 1563 from Patent EP2559767	NA	coding protein	psRNATarget
JB163899.1	ncRNA:24   CGAGCAAUCGAAUUGCUCAGUCGA   1   ||||*||||||||||||||||*|| targets:61   GCUCAUUAGCUUAACGAGUCAACU   84 Target Full Sequence	1.5	Sequence 1563 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235568.1	ncRNA:24   CGAGCAAUCGAAUUGCUCAGUCGA   1   |||||||||||||||||||||||| targets:15   GCUCGUUAGCUUAACGAGUCAGCU   38 Target Full Sequence	0.0	Sequence 1563 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235568.1	ncRNA:24   CGAGCAAUCGAAUUGCUCAGUCGA   1   ||||*||||||||||||||||*|| targets:61   GCUCAUUAGCUUAACGAGUCAACU   84 Target Full Sequence	1.5	Sequence 1563 from Patent EP2985353	NA	coding protein	psRNATarget
LQ242278.1	ncRNA:24   CGAGCAAUCGAAUUGCUCAGUCGA   1   ||||||||||||||||||*||||| targets:59   GCUCGUUAGCUUAACGAGCCAGCU   82 Target Full Sequence	1.5	Sequence 8273 from Patent EP2985353	NA	coding protein	psRNATarget
HI410148.1	ncRNA:24   CGAGCAAUCGAAUUGCUCAGUCGA   1   ||||||||||||||||||*||||| targets:59   GCUCGUUAGCUUAACGAGCCAGCU   82 Target Full Sequence	1.5	Sequence 8273 from Patent EP2074227	NA	coding protein	psRNATarget
JB170609.1	ncRNA:24   CGAGCAAUCGAAUUGCUCAGUCGA   1   ||||||||||||||||||*||||| targets:59   GCUCGUUAGCUUAACGAGCCAGCU   82 Target Full Sequence	1.5	Sequence 8273 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235551.1	ncRNA:24   CGAGCAAUCGAAUUGCUCAGUCGA   1   ||||**||||||||||||*||||| targets:41   GCUCAGUAGCUUAACGAGCCAGCU   64 Target Full Sequence	2.5	Sequence 1546 from Patent EP2985353	NA	coding protein	psRNATarget
JB163882.1	ncRNA:24   CGAGCAAUCGAAUUGCUCAGUCGA   1   ||||**||||||||||||*||||| targets:41   GCUCAGUAGCUUAACGAGCCAGCU   64 Target Full Sequence	2.5	Sequence 1546 from Patent EP2559767	NA	coding protein	psRNATarget
HI403421.1	ncRNA:24   CGAGCAAUCGAAUUGCUCAGUCGA   1   ||||**||||||||||||*||||| targets:41   GCUCAGUAGCUUAACGAGCCAGCU   64 Target Full Sequence	2.5	Sequence 1546 from Patent EP2074227	NA	coding protein	psRNATarget
EU949807.1	ncRNA:24   CGAGCAAUCGAAUUGCUCAGUCGA   1   ||||||||*|||||||||*||||| targets:768   GCUCGUUAUCUUAACGAGCCAGCU   791 Target Full Sequence	2.5	Zea mays clone 446253 mRNA sequence	NA	coding protein	psRNATarget