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BaseInfo

ncRNA ID novel_zma_miR1625
Species Zea mays
Class miRNA
Genome position Chr3:67928913-67929098 [-]
Reference genome RefGen_v4
Source SRR2089711;SRR2089712;SRR2089713;SRR2089714;SRR2287031;SRR2287161;SRR2287162;SRR2287164;SRR2287165;SRR1997865;SRR2089700;SRR2089704
Length 21
Mature sequence(if miRNA) 1 - UGCACAUAAGGUCUGAUUGCA - 21
Stem-loop(if miRNA) --        G                                   A         A  UC   U   UAU  --C     A   UUAAACCCUU
  CAAUCAGG CUUAUGUGCAAGCGUGUAAGCGAGUUUUUUGGUCC UUAGAUCAU AU  AAC AUA   CA   AUCUA CAC          C
  |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||  ||| |||   ||   ||||| |||
  GUUAGUCU GAAUACACGUUCGUAUAUUCGCUUAGAGAACUAGG AAUCUAGUA UA  UUG UAU   GU   UAGAU GUG          C
AC        G                                   C         C  GA   C   -CU  AUU     -   CCAACCACCA
Stem-loop sequence CAAUCAGGGCUUAUGUGCAAGCGUGUAAGCGAGUUUUUUGGUCCAUUAGAUCAUAAUUCAACUAUAUAUCACAUCUAACACUUAAACCCUUCCACCACCAACCGUGUAGAUUUAUGUCUAUCGUUAGAUCAUGAUCUAACGGAUCAAGAGAUUCGCUUAUAUGCUUGCACAUAAGGUCUGAUUGCA