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BaseInfo

ncRNA ID novel_zma_miR1614
Species Zea mays
Class miRNA
Genome position Chr3:151960795-151960862 [-]
Reference genome RefGen_v4
Source SRR2089711;SRR5451003;SRR2089699
Length 24
Mature sequence(if miRNA) 1 - UCAAAUGUAGAAAACGGUACGGAU - 24
Stem-loop(if miRNA) --    U        -      -U    UAAAUAC
  CCGU CUGUUUUC AUAUUU  UCCG       A
  |||| |||||||| ||||||  ||||
  GGCA GGCAAAAG UGUAAA  GGGC       G
UA    U        A      CU    UGGCAAA
Stem-loop sequence CCGUUCUGUUUUCAUAUUUUUCCGUAAAUACAGAAACGGUCGGGUCAAAUGUAGAAAACGGUACGGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008664386.2
ncRNA:24   UAGGCAUGGCAAAAGAUGUAAACU   1
  =|||||||=||||||*||||||||
targets:1320   GUCCGUACUGUUUUCCACAUUUGA   1343

2.5 PREDICTED: Zea mays alpha/beta-Hydrolases superfamily protein (pco066796), transcript variant X3, mRNA NA coding protein psRNATarget
XM_008664382.2
ncRNA:24   UAGGCAUGGCAAAAGAUGUAAACU   1
  =|||||||=||||||*||||||||
targets:1412   GUCCGUACUGUUUUCCACAUUUGA   1435

2.5 PREDICTED: Zea mays alpha/beta-Hydrolases superfamily protein (pco066796), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020551120.1
ncRNA:24   UAGGCAUGGCAAAAGAUGUAAACU   1
  =|||||||=||||||*||||||||
targets:1067   GUCCGUACUGUUUUCCACAUUUGA   1090

2.5 PREDICTED: Zea mays alpha/beta-Hydrolases superfamily protein (pco066796), transcript variant X2, mRNA NA coding protein psRNATarget
AY108659.1
ncRNA:24   UAGGCAUGGCAAAAGAUGUAAACU   1
  |*|=|||=|||||||||=||||||
targets:830   ACCUGUAUCGUUUUCUAUAUUUGA   853

2.5 Zea mays PCO103032 mRNA sequence NA coding protein psRNATarget