ncRNA ID | novel_zma_miR1613 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:161335859-161336039 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089711;SRR1618883;SRR1745812;SRR2089699;SRR2089703;SRR2089705;SRR2089708 |
Length | 21 |
Mature sequence(if miRNA) | 1 - CAUGUAGGAAAAGUUGGCGCC - 21 |
Stem-loop(if miRNA) |
--                                      CCA                               C     U  CG   GGG   CGCCAACUUUUCCUACGUGGCAGCCGAUGUGGCAAGUC   GGGGGUCGGCGCCAUAGAUCUUGGCGCCGAC CCCCU GA  GUG   U   ||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||| ||  |||   GCGGUUGAAAAGGAUGUACCGUCGGCUACACCGUUCAG   UCCCCAGCCGCGGUAUCUAGAACCGCGGCUG GGGGA CU  CGU   C CC                                      -AG                               A     C  AU   GGC |
Stem-loop sequence | CGCCAACUUUUCCUACGUGGCAGCCGAUGUGGCAAGUCCCAGGGGGUCGGCGCCAUAGAUCUUGGCGCCGACCCCCCUUGACGGUGGGGUCCGGUGCUAUCCAGGGGAGUCGGCGCCAAGAUCUAUGGCGCCGACCCCUGAGACUUGCCACAUCGGCUGCCAUGUAGGAAAAGUUGGCGCC |