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BaseInfo

ncRNA ID	novel_zma_miR1612
Species	Zea mays
Class	miRNA
Genome position	Chr3:179107757-179107868 [-]
Reference genome	RefGen_v4
Source	SRR2089711;SRR2089712
Length	21
Mature sequence(if miRNA)	1 - GUGGUGCUGAACUAGGGGCAU - 21
Stem-loop(if miRNA)	--                   C          AA C    CU           AUG   GCCCUUAGUUCAGCAUCAC GUUCAGUUUU  C UUCU  GGUAGUAAGGG   G   ||||||||||||||||||| ||||||||||  | ||||  |||||||||||   CGGGGAUCAAGUCGUGGUG CGAGUCAAAA  G GAGA  UCAUCAUUUUU   G UA                   A          CG U    AG           GCA
Stem-loop sequence	GCCCUUAGUUCAGCAUCACCGUUCAGUUUUAACCUUCUCUGGUAGUAAGGGAUGGGACGUUUUUACUACUGAAGAGUGGCAAAACUGAGCAGUGGUGCUGAACUAGGGGCAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU944656.1	ncRNA:21   UACGGGGAUCAAGUCGUGGUG   1   |||=||||||||=|||||||| targets:814   AUGUCCCUAGUUUAGCACCAC   834 Target Full Sequence	2.5	Zea mays clone 225302 mRNA sequence	NA	coding protein	psRNATarget
EU975665.1	ncRNA:21   UACGGGGAUCAAGUCGUGGUG   1   =||=||||||||=|||||||| targets:2138   GUGUCCCUAGUUUAGCACCAC   2158 Target Full Sequence	2.5	Zea mays clone 496098 mRNA sequence	NA	coding protein	psRNATarget
XM_008680748.2	ncRNA:21   UACGGGGAUCAAGUCGUGGUG   1   =||=||||||||=|||||||| targets:2248   GUGUCCCUAGUUUAGCACCAC   2268 Target Full Sequence	2.5	PREDICTED: Zea mays ubiquitin carboxyl-terminal hydrolase 21 (LOC103653937), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008680747.2	ncRNA:21   UACGGGGAUCAAGUCGUGGUG   1   =||=||||||||=|||||||| targets:2340   GUGUCCCUAGUUUAGCACCAC   2360 Target Full Sequence	2.5	PREDICTED: Zea mays ubiquitin carboxyl-terminal hydrolase 21 (LOC103653937), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EZ069782.1	ncRNA:21   UACGGGGAUCAAGUCGUGGUG   1   *||||||||*||||||||||= targets:302   UUGCCCCUAUUUCAGCACCAU   322 Target Full Sequence	2.5	TSA: Zea mays contig05418, mRNA sequence	NA	coding protein	psRNATarget