ncRNA ID | novel_zma_miR1609 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:187823855-187824068 [+] |
Reference genome | RefGen_v4 |
Source | SRR1583944;SRR1583942 |
Length | 24 |
Mature sequence(if miRNA) | 191 - GUACAUGGAUCUAGAUGACAUACU - 214 |
Stem-loop(if miRNA) |
--        A                 C            --A          U   A                      C  --------A     CAUGGCGUUCCACC   UGUGUCAU UAGGUCCAUGUACUAUU AAGGUUACAGGA   CCCAUUAACU UUU GGGUGUGUCAUCUAGGUCCAUG AC         ACUGA              U   |||||||| ||||||||||||||||| ||||||||||||   |||||||||| ||| |||||||||||||||||||||| ||         |||||   AUACAGUA AUCUAGGUACAUGAUAA UUCCAGUGUCCU   GGGUAAUUGA AAA UCCACACAGUAGAUCCAGGUAC UG         GGUGC              C UC        G                 U            UUG          U   G                      A  AUAAGUUCC     AGUGGCCAACCUGA |
Stem-loop sequence | UGUGUCAUAUAGGUCCAUGUACUAUUCAAGGUUACAGGAACCCAUUAACUUUUUAGGGUGUGUCAUCUAGGUCCAUGCACAACUGACAUGGCGUUCCACCUCAGUCCAACCGGUGACGUGGCCUUGAAUAGUACAUGGACCUAGAUGACACACCUGAAAUAGUUAAUGGGGUUUCCUGUGACCUUUAAUAGUACAUGGAUCUAGAUGACAUACU |