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BaseInfo

ncRNA ID novel_zma_miR1609
Species Zea mays
Class miRNA
Genome position Chr3:187823855-187824068 [+]
Reference genome RefGen_v4
Source SRR1583944;SRR1583942
Length 24
Mature sequence(if miRNA) 191 - GUACAUGGAUCUAGAUGACAUACU - 214
Stem-loop(if miRNA) --        A                 C            --A          U   A                      C  --------A     CAUGGCGUUCCACC
  UGUGUCAU UAGGUCCAUGUACUAUU AAGGUUACAGGA   CCCAUUAACU UUU GGGUGUGUCAUCUAGGUCCAUG AC         ACUGA              U
  |||||||| ||||||||||||||||| ||||||||||||   |||||||||| ||| |||||||||||||||||||||| ||         |||||
  AUACAGUA AUCUAGGUACAUGAUAA UUCCAGUGUCCU   GGGUAAUUGA AAA UCCACACAGUAGAUCCAGGUAC UG         GGUGC              C
UC        G                 U            UUG          U   G                      A  AUAAGUUCC     AGUGGCCAACCUGA
Stem-loop sequence UGUGUCAUAUAGGUCCAUGUACUAUUCAAGGUUACAGGAACCCAUUAACUUUUUAGGGUGUGUCAUCUAGGUCCAUGCACAACUGACAUGGCGUUCCACCUCAGUCCAACCGGUGACGUGGCCUUGAAUAGUACAUGGACCUAGAUGACACACCUGAAAUAGUUAAUGGGGUUUCCUGUGACCUUUAAUAGUACAUGGAUCUAGAUGACAUACU