ncRNA ID | novel_zma_miR1608 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:208843818-208843888 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089711 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CGGACUGUCCGCGCGUGCGCAGAG - 24 |
Stem-loop(if miRNA) |
--AA A   -               -  C  A    G     G GCA GUGCGGACGGUCCGG CC CG GGCC G     | ||| ||||||||||||||| || || ||||     C CGU CGCGCCUGUCAGGCC GG GC CUGG A GAGA G   G               U  C  -    C |
Stem-loop sequence | AAGAGCAGUGCGGACGGUCCGGCCCCGAGGCCGGACGGUCCGCGGUCCGGACUGUCCGCGCGUGCGCAGAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ061701.1 |
|
1.5 | TSA: Zea mays contig62823, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EU947355.1 |
|
1.5 | Zea mays clone 340715 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EU940813.1 |
|
1.5 | Zea mays clone 1145688 mRNA sequence | NA | coding protein | psRNATarget |