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BaseInfo

ncRNA ID	novel_zma_miR1604
Species	Zea mays
Class	miRNA
Genome position	Chr3:228227236-228227313 [-]
Reference genome	RefGen_v4
Source	SRR2089711;SRR2287164
Length	24
Mature sequence(if miRNA)	1 - ACUAAUAAAAAGAAACGGAGGGAA - 24
Stem-loop(if miRNA)	--                                  CAA   CCCUCCGUUUCUUUUUAUUAGUCGCUGGAUAGUG   A   ||||||||||||||||||||||||||||||||||   GGGAGGCAAAGAAAAAUAAUCAGCGACCUAUCAC   A AA                                  AUU
Stem-loop sequence	CCCUCCGUUUCUUUUUAUUAGUCGCUGGAUAGUGCAAAAUUACACUAUCCAGCGACUAAUAAAAAGAAACGGAGGGAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008658752.2	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||||| targets:2046   CUCCCUCCGUUUCUUUUUAUUAGU   2069 Target Full Sequence	0.0	PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020542418.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||||| targets:1979   CUCCCUCCGUUUCUUUUUAUUAGU   2002 Target Full Sequence	0.0	PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008656936.2	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||||| targets:166   CUCCCUCCGUUUCUUUUUAUUAGU   189 Target Full Sequence	0.0	PREDICTED: Zea mays putative HLH DNA-binding domain superfamily protein (LOC100381500), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008669400.2	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||||| targets:1602   CUCCCUCCGUUUCUUUUUAUUAGU   1625 Target Full Sequence	0.0	PREDICTED: Zea mays Pentatricopeptide repeat-containing protein PNM1 mitochondrial (LOC100274849), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT024153.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||||| targets:192   CUCCCUCCGUUUCUUUUUAUUAGU   215 Target Full Sequence	0.0	Zea mays clone EL01N0438E01 mRNA sequence	NA	coding protein	psRNATarget
EZ061772.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||||| targets:186   CUCCCUCCGUUUCUUUUUAUUAGU   209 Target Full Sequence	0.0	TSA: Zea mays contig62894, mRNA sequence	NA	coding protein	psRNATarget
EU973473.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||||| targets:651   CUCCCUCCGUUUCUUUUUAUUAGU   674 Target Full Sequence	0.0	Zea mays clone 399411 mRNA sequence	NA	coding protein	psRNATarget
JB166285.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||||| targets:2   CUCCCUCCGUUUCUUUUUAUUAGU   25 Target Full Sequence	0.0	Sequence 3949 from Patent EP2559767	NA	coding protein	psRNATarget
LQ237954.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||||| targets:2   CUCCCUCCGUUUCUUUUUAUUAGU   25 Target Full Sequence	0.0	Sequence 3949 from Patent EP2985353	NA	coding protein	psRNATarget
HI405824.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||||| targets:2   CUCCCUCCGUUUCUUUUUAUUAGU   25 Target Full Sequence	0.0	Sequence 3949 from Patent EP2074227	NA	coding protein	psRNATarget
HI405830.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||||| targets:2   CUCCCUCCGUUUCUUUUUAUUAGU   25 Target Full Sequence	0.0	Sequence 3955 from Patent EP2074227	NA	coding protein	psRNATarget
LQ237960.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||||| targets:2   CUCCCUCCGUUUCUUUUUAUUAGU   25 Target Full Sequence	0.0	Sequence 3955 from Patent EP2985353	NA	coding protein	psRNATarget
JB166291.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||||| targets:2   CUCCCUCCGUUUCUUUUUAUUAGU   25 Target Full Sequence	0.0	Sequence 3955 from Patent EP2559767	NA	coding protein	psRNATarget
HI403267.1	ncRNA:24   AAGGGAGGCAAAGAAAAA-UAAUCA   1   ||||||||||||||||||-|||||| targets:102   UUCCCUCCGUUUCUUUUUUAUUAGU   126 Target Full Sequence	3.0	Sequence 1392 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235397.1	ncRNA:24   AAGGGAGGCAAAGAAAAA-UAAUCA   1   ||||||||||||||||||-|||||| targets:102   UUCCCUCCGUUUCUUUUUUAUUAGU   126 Target Full Sequence	3.0	Sequence 1392 from Patent EP2985353	NA	coding protein	psRNATarget
JB163728.1	ncRNA:24   AAGGGAGGCAAAGAAAAA-UAAUCA   1   ||||||||||||||||||-|||||| targets:102   UUCCCUCCGUUUCUUUUUUAUUAGU   126 Target Full Sequence	3.0	Sequence 1392 from Patent EP2559767	NA	coding protein	psRNATarget
XM_008664460.2	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||=|||||||||||||||| targets:115   CUCCCUCUGUUUCUUUUUAUUAGU   138 Target Full Sequence	1.0	PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU970288.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *|||||=||||||||||||||||| targets:1333   CUCCCUUCGUUUCUUUUUAUUAGU   1356 Target Full Sequence	1.0	Zea mays clone 343094 metal tolerance protein C3 mRNA, complete cds	NA	coding protein	psRNATarget
BT070166.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *|||||||||||=||||||||||| targets:766   CUCCCUCCGUUUUUUUUUAUUAGU   789 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0141C23 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001328133.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *|||||||||||=||||||||||| targets:766   CUCCCUCCGUUUUUUUUUAUUAGU   789 Target Full Sequence	1.5	Zea mays Methionyl-tRNA synthetase (LOC100384454), mRNA	NA	coding protein	psRNATarget
XM_008664463.2	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||=|||||||||||||||| targets:95   CUCCCUCUGUUUCUUUUUAUUAGU   118 Target Full Sequence	1.0	PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X3, mRNA	NA	coding protein	psRNATarget
JB166321.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||=|||||||||||||||||||| targets:7   CUCUCUCCGUUUCUUUUUAUUAGU   30 Target Full Sequence	0.0	Sequence 3985 from Patent EP2559767	NA	coding protein	psRNATarget
LQ237990.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||=|||||||||||||||||||| targets:7   CUCUCUCCGUUUCUUUUUAUUAGU   30 Target Full Sequence	0.0	Sequence 3985 from Patent EP2985353	NA	coding protein	psRNATarget
HI405860.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||=|||||||||||||||||||| targets:7   CUCUCUCCGUUUCUUUUUAUUAGU   30 Target Full Sequence	0.0	Sequence 3985 from Patent EP2074227	NA	coding protein	psRNATarget
JB166289.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||=|||||||||||||||||||| targets:2   CUCUCUCCGUUUCUUUUUAUUAGU   25 Target Full Sequence	0.0	Sequence 3953 from Patent EP2559767	NA	coding protein	psRNATarget
HI405828.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||=|||||||||||||||||||| targets:2   CUCUCUCCGUUUCUUUUUAUUAGU   25 Target Full Sequence	0.0	Sequence 3953 from Patent EP2074227	NA	coding protein	psRNATarget
LQ237958.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||=|||||||||||||||||||| targets:2   CUCUCUCCGUUUCUUUUUAUUAGU   25 Target Full Sequence	0.0	Sequence 3953 from Patent EP2985353	NA	coding protein	psRNATarget
JB166303.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||=|||||||||||||||||||* targets:2   CUCUCUCCGUUUCUUUUUAUUAGC   25 Target Full Sequence	1.0	Sequence 3967 from Patent EP2559767	NA	coding protein	psRNATarget
HI405842.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||=|||||||||||||||||||* targets:2   CUCUCUCCGUUUCUUUUUAUUAGC   25 Target Full Sequence	1.0	Sequence 3967 from Patent EP2074227	NA	coding protein	psRNATarget
LQ237972.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||=|||||||||||||||||||* targets:2   CUCUCUCCGUUUCUUUUUAUUAGC   25 Target Full Sequence	1.0	Sequence 3967 from Patent EP2985353	NA	coding protein	psRNATarget
XM_020546613.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:3700   CUCCCUCCGUUUCUUUUUAUUUGU   3723 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020544902.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *|||*||||||||||||||||||| targets:3152   CUCCAUCCGUUUCUUUUUAUUAGU   3175 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC100216637 (LOC100216637), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020544903.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *|||*||||||||||||||||||| targets:3143   CUCCAUCCGUUUCUUUUUAUUAGU   3166 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC100216637 (LOC100216637), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020546612.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:2921   CUCCCUCCGUUUCUUUUUAUUUGU   2944 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020546614.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:2815   CUCCCUCCGUUUCUUUUUAUUUGU   2838 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020546615.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:2798   CUCCCUCCGUUUCUUUUUAUUUGU   2821 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020546173.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:1465   CUCCCUCCGUUUCUUUUUAUUUGU   1488 Target Full Sequence	1.5	PREDICTED: Zea mays myb-related protein P-like (LOC109943268), mRNA	NA	coding protein	psRNATarget
XM_020544250.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:2437   CUCCCUCCGUUUCUUUUUAUUUGU   2460 Target Full Sequence	1.5	PREDICTED: Zea mays G-type lectin S-receptor-like serine/threonine-protein kinase B120 (LOC103638818), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008675770.2	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||*|||||||||||||||||||| targets:1810   CUCACUCCGUUUCUUUUUAUUAGU   1833 Target Full Sequence	0.0	PREDICTED: Zea mays pectinesterase-like (LOC103650113), mRNA	NA	coding protein	psRNATarget
NM_001148943.2	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:1545   CUCCCUCCGUUUCUUUUUAUUUGU   1568 Target Full Sequence	1.5	Zea mays uncharacterized LOC100274590 (LOC100274590), mRNA	NA	coding protein	psRNATarget
XM_008677073.2	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:1529   CUCCCUCCGUUUCUUUUUAUUUGU   1552 Target Full Sequence	1.5	PREDICTED: Zea mays probable glycosyltransferase At5g03795 (LOC103651446), mRNA	NA	coding protein	psRNATarget
XM_008671992.2	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:1274   CUCCCUCCGUUUCUUUUUAUUUGU   1297 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008647346.2	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:143   CUCCCUCCGUUUCUUUUUAUUUGU   166 Target Full Sequence	1.5	PREDICTED: Zea mays E3 ubiquitin-protein ligase Os03g0188200 (LOC103626988), mRNA	NA	coding protein	psRNATarget
EU965844.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:1290   CUCCCUCCGUUUCUUUUUAUUUGU   1313 Target Full Sequence	1.5	Zea mays clone 289333 wax synthase isoform 3 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001156655.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:1290   CUCCCUCCGUUUCUUUUUAUUUGU   1313 Target Full Sequence	1.5	Zea mays wax synthase (LOC100283756), mRNA	NA	coding protein	psRNATarget
XM_008671993.2	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:1168   CUCCCUCCGUUUCUUUUUAUUUGU   1191 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X2, mRNA	NA	coding protein	psRNATarget
BT037092.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *|||*||||||||||||||||||| targets:1086   CUCCAUCCGUUUCUUUUUAUUAGU   1109 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0154F16 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001143050.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *|||*||||||||||||||||||| targets:1086   CUCCAUCCGUUUCUUUUUAUUAGU   1109 Target Full Sequence	0.0	Zea mays uncharacterized LOC100216637 (LOC100216637), mRNA	NA	coding protein	psRNATarget
BT060817.2	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:232   CUCCCUCCGUUUCUUUUUAUUUGU   255 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0054B23 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001151882.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:571   CUCCCUCCGUUUCUUUUUAUUUGU   594 Target Full Sequence	1.5	Zea mays uncharacterized LOC100278686 (LOC100278686), mRNA	NA	coding protein	psRNATarget
EU974849.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:571   CUCCCUCCGUUUCUUUUUAUUUGU   594 Target Full Sequence	1.5	Zea mays clone 459794 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU964901.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:499   CUCCCUCCGUUUCUUUUUAUUUGU   522 Target Full Sequence	1.5	Zea mays clone 282450 mRNA sequence	NA	coding protein	psRNATarget
HI403369.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:13   CUCCCUCCGUUUCUUUUUAUUUGU   36 Target Full Sequence	1.5	Sequence 1494 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235499.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:13   CUCCCUCCGUUUCUUUUUAUUUGU   36 Target Full Sequence	1.5	Sequence 1494 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235486.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:13   CUCCCUCCGUUUCUUUUUAUUUGU   36 Target Full Sequence	1.5	Sequence 1481 from Patent EP2985353	NA	coding protein	psRNATarget
JB163830.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:13   CUCCCUCCGUUUCUUUUUAUUUGU   36 Target Full Sequence	1.5	Sequence 1494 from Patent EP2559767	NA	coding protein	psRNATarget
HI403356.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:13   CUCCCUCCGUUUCUUUUUAUUUGU   36 Target Full Sequence	1.5	Sequence 1481 from Patent EP2074227	NA	coding protein	psRNATarget
JB163817.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:13   CUCCCUCCGUUUCUUUUUAUUUGU   36 Target Full Sequence	1.5	Sequence 1481 from Patent EP2559767	NA	coding protein	psRNATarget
HI403279.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:13   CUCCCUCCGUUUCUUUUUAUUUGU   36 Target Full Sequence	1.5	Sequence 1404 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235409.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:13   CUCCCUCCGUUUCUUUUUAUUUGU   36 Target Full Sequence	1.5	Sequence 1404 from Patent EP2985353	NA	coding protein	psRNATarget
JB163740.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:13   CUCCCUCCGUUUCUUUUUAUUUGU   36 Target Full Sequence	1.5	Sequence 1404 from Patent EP2559767	NA	coding protein	psRNATarget
JB163755.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:13   CUCCCUCCGUUUCUUUUUAUUUGU   36 Target Full Sequence	1.5	Sequence 1419 from Patent EP2559767	NA	coding protein	psRNATarget
HI403294.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:13   CUCCCUCCGUUUCUUUUUAUUUGU   36 Target Full Sequence	1.5	Sequence 1419 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235424.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:13   CUCCCUCCGUUUCUUUUUAUUUGU   36 Target Full Sequence	1.5	Sequence 1419 from Patent EP2985353	NA	coding protein	psRNATarget
HI408945.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29 Target Full Sequence	1.5	Sequence 7070 from Patent EP2074227	NA	coding protein	psRNATarget
HI409616.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29 Target Full Sequence	1.5	Sequence 7741 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242091.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29 Target Full Sequence	1.5	Sequence 8086 from Patent EP2985353	NA	coding protein	psRNATarget
JB169406.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29 Target Full Sequence	1.5	Sequence 7070 from Patent EP2559767	NA	coding protein	psRNATarget
HI408618.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29 Target Full Sequence	1.5	Sequence 6743 from Patent EP2074227	NA	coding protein	psRNATarget
LQ240748.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29 Target Full Sequence	1.5	Sequence 6743 from Patent EP2985353	NA	coding protein	psRNATarget
JB169171.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29 Target Full Sequence	1.5	Sequence 6835 from Patent EP2559767	NA	coding protein	psRNATarget
HI408570.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29 Target Full Sequence	1.5	Sequence 6695 from Patent EP2074227	NA	coding protein	psRNATarget
HI409699.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29 Target Full Sequence	1.5	Sequence 7824 from Patent EP2074227	NA	coding protein	psRNATarget
HI408710.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29 Target Full Sequence	1.5	Sequence 6835 from Patent EP2074227	NA	coding protein	psRNATarget
LQ240700.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29 Target Full Sequence	1.5	Sequence 6695 from Patent EP2985353	NA	coding protein	psRNATarget
LQ242326.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29 Target Full Sequence	1.5	Sequence 8321 from Patent EP2985353	NA	coding protein	psRNATarget
HI409328.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29 Target Full Sequence	1.5	Sequence 7453 from Patent EP2074227	NA	coding protein	psRNATarget
JB170077.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29 Target Full Sequence	1.5	Sequence 7741 from Patent EP2559767	NA	coding protein	psRNATarget
JB170422.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29 Target Full Sequence	1.5	Sequence 8086 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241829.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29 Target Full Sequence	1.5	Sequence 7824 from Patent EP2985353	NA	coding protein	psRNATarget
JB170657.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29 Target Full Sequence	1.5	Sequence 8321 from Patent EP2559767	NA	coding protein	psRNATarget
JB169031.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29 Target Full Sequence	1.5	Sequence 6695 from Patent EP2559767	NA	coding protein	psRNATarget
HI409961.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29 Target Full Sequence	1.5	Sequence 8086 from Patent EP2074227	NA	coding protein	psRNATarget
JB170160.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29 Target Full Sequence	1.5	Sequence 7824 from Patent EP2559767	NA	coding protein	psRNATarget
LQ240840.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29 Target Full Sequence	1.5	Sequence 6835 from Patent EP2985353	NA	coding protein	psRNATarget
HI410196.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29 Target Full Sequence	1.5	Sequence 8321 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241458.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29 Target Full Sequence	1.5	Sequence 7453 from Patent EP2985353	NA	coding protein	psRNATarget
LQ241075.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29 Target Full Sequence	1.5	Sequence 7070 from Patent EP2985353	NA	coding protein	psRNATarget
JB169079.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29 Target Full Sequence	1.5	Sequence 6743 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241746.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29 Target Full Sequence	1.5	Sequence 7741 from Patent EP2985353	NA	coding protein	psRNATarget
JB169789.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29 Target Full Sequence	1.5	Sequence 7453 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241745.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29 Target Full Sequence	1.5	Sequence 7740 from Patent EP2985353	NA	coding protein	psRNATarget
JB170076.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29 Target Full Sequence	1.5	Sequence 7740 from Patent EP2559767	NA	coding protein	psRNATarget
HI409615.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||||||||||||||||*|| targets:6   CUCCCUCCGUUUCUUUUUAUUUGU   29 Target Full Sequence	1.5	Sequence 7740 from Patent EP2074227	NA	coding protein	psRNATarget
XM_008651543.2	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *|=||||||||||||||||||*|| targets:2498   CUUCCUCCGUUUCUUUUUAUUUGU   2521 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU957018.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||=|||||||||||||*|| targets:2002   CUCCCUCUGUUUCUUUUUAUUUGU   2025 Target Full Sequence	2.5	Zea mays clone 1580670 cytochrome P450 CYP84A33v2 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008656166.2	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||=|||||||||||||*|| targets:1268   CUCCCUCUGUUUCUUUUUAUUUGU   1291 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100193630 (LOC100193630), transcript variant X1, mRNA	NA	coding protein	psRNATarget
NM_001138729.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||=|||||||||||||*|| targets:1404   CUCCCUCUGUUUCUUUUUAUUUGU   1427 Target Full Sequence	2.5	Zea mays uncharacterized LOC100193630 (LOC100193630), mRNA	NA	coding protein	psRNATarget
BT035950.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||=|||||||||||||*|| targets:1404   CUCCCUCUGUUUCUUUUUAUUUGU   1427 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0089G20 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008651544.2	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *|=||||||||||||||||||*|| targets:1357   CUUCCUCCGUUUCUUUUUAUUUGU   1380 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008656167.2	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||=|||||||||||||*|| targets:1223   CUCCCUCUGUUUCUUUUUAUUUGU   1246 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100193630 (LOC100193630), transcript variant X2, mRNA	NA	coding protein	psRNATarget
BT088158.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||=|||||||||||||*|| targets:1204   CUCCCUCUGUUUCUUUUUAUUUGU   1227 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0038O11 mRNA, complete cds	NA	coding protein	psRNATarget
EU973028.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||=|||||||||||||*|| targets:1170   CUCCCUCUGUUUCUUUUUAUUUGU   1193 Target Full Sequence	2.5	Zea mays clone 391970 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU956063.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||=|||||||||||||*|| targets:1064   CUCCCUCUGUUUCUUUUUAUUUGU   1087 Target Full Sequence	2.5	Zea mays clone 1556707 mRNA sequence	NA	coding protein	psRNATarget
BT068381.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||=|||||||||||||*|| targets:1111   CUCCCUCUGUUUCUUUUUAUUUGU   1134 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0135M15 mRNA, complete cds	NA	coding protein	psRNATarget
HI408623.1	ncRNA:24   AAGGGAGG-CAAAGAAAAAUAAUCA   1   *|||||||-|||||||||||||||* targets:10   CUCCCUCCAGUUUCUUUUUAUUAGG   34 Target Full Sequence	3.0	Sequence 6748 from Patent EP2074227	NA	coding protein	psRNATarget
JB169084.1	ncRNA:24   AAGGGAGG-CAAAGAAAAAUAAUCA   1   *|||||||-|||||||||||||||* targets:10   CUCCCUCCAGUUUCUUUUUAUUAGG   34 Target Full Sequence	3.0	Sequence 6748 from Patent EP2559767	NA	coding protein	psRNATarget
LQ240753.1	ncRNA:24   AAGGGAGG-CAAAGAAAAAUAAUCA   1   *|||||||-|||||||||||||||* targets:10   CUCCCUCCAGUUUCUUUUUAUUAGG   34 Target Full Sequence	3.0	Sequence 6748 from Patent EP2985353	NA	coding protein	psRNATarget
LQ241729.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||=|||||||||||||||||*|| targets:6   CUCUCUCCGUUUCUUUUUAUUUGU   29 Target Full Sequence	1.5	Sequence 7724 from Patent EP2985353	NA	coding protein	psRNATarget
HI409599.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||=|||||||||||||||||*|| targets:6   CUCUCUCCGUUUCUUUUUAUUUGU   29 Target Full Sequence	1.5	Sequence 7724 from Patent EP2074227	NA	coding protein	psRNATarget
JB170060.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||=|||||||||||||||||*|| targets:6   CUCUCUCCGUUUCUUUUUAUUUGU   29 Target Full Sequence	1.5	Sequence 7724 from Patent EP2559767	NA	coding protein	psRNATarget
HI410015.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||=|||||||||||||*|| targets:6   CUCCCUCUGUUUCUUUUUAUUUGU   29 Target Full Sequence	2.5	Sequence 8140 from Patent EP2074227	NA	coding protein	psRNATarget
JB170476.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||=|||||||||||||*|| targets:6   CUCCCUCUGUUUCUUUUUAUUUGU   29 Target Full Sequence	2.5	Sequence 8140 from Patent EP2559767	NA	coding protein	psRNATarget
LQ242145.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||=|||||||||||||*|| targets:6   CUCCCUCUGUUUCUUUUUAUUUGU   29 Target Full Sequence	2.5	Sequence 8140 from Patent EP2985353	NA	coding protein	psRNATarget
LQ240984.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||=|||||||||||||||||*|| targets:3   CUCUCUCCGUUUCUUUUUAUUUGU   26 Target Full Sequence	1.5	Sequence 6979 from Patent EP2985353	NA	coding protein	psRNATarget
JB169315.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||=|||||||||||||||||*|| targets:3   CUCUCUCCGUUUCUUUUUAUUUGU   26 Target Full Sequence	1.5	Sequence 6979 from Patent EP2559767	NA	coding protein	psRNATarget
HI408854.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||=|||||||||||||||||*|| targets:3   CUCUCUCCGUUUCUUUUUAUUUGU   26 Target Full Sequence	1.5	Sequence 6979 from Patent EP2074227	NA	coding protein	psRNATarget
HI409094.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||=|||||||||||||*|| targets:3   CUCCCUCUGUUUCUUUUUAUUUGU   26 Target Full Sequence	2.5	Sequence 7219 from Patent EP2074227	NA	coding protein	psRNATarget
JB169555.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||=|||||||||||||*|| targets:3   CUCCCUCUGUUUCUUUUUAUUUGU   26 Target Full Sequence	2.5	Sequence 7219 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241224.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   *||||||=|||||||||||||*|| targets:3   CUCCCUCUGUUUCUUUUUAUUUGU   26 Target Full Sequence	2.5	Sequence 7219 from Patent EP2985353	NA	coding protein	psRNATarget
EU952863.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   **|||||||||||||||||||*|| targets:558   ACCCCUCCGUUUCUUUUUAUUUGU   581 Target Full Sequence	1.5	Zea mays clone 1291487 oleosin 16 kDa mRNA, complete cds	NA	coding protein	psRNATarget
EU976836.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   **|||||||||||||||||||*|| targets:556   ACCCCUCCGUUUCUUUUUAUUUGU   579 Target Full Sequence	1.5	Zea mays clone 991472 oleosin 16 kDa mRNA, complete cds	NA	coding protein	psRNATarget
EU952246.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   **|||||||||||||||||||*|| targets:557   ACCCCUCCGUUUCUUUUUAUUUGU   580 Target Full Sequence	1.5	Zea mays clone 1272655 oleosin 16 kDa mRNA, complete cds	NA	coding protein	psRNATarget
NM_001349993.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   **|||||||||||||||||||*|| targets:557   ACCCCUCCGUUUCUUUUUAUUUGU   580 Target Full Sequence	1.5	Zea mays oleosin 16 kDa (oleosin), mRNA	NA	coding protein	psRNATarget
EU968632.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   **|||||||||||||||||||*|| targets:560   ACCCCUCCGUUUCUUUUUAUUUGU   583 Target Full Sequence	1.5	Zea mays clone 322947 oleosin 16 kDa mRNA, complete cds	NA	coding protein	psRNATarget
EU975941.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   **|||||||||||||||||||*|| targets:551   ACCCCUCCGUUUCUUUUUAUUUGU   574 Target Full Sequence	1.5	Zea mays clone 506054 oleosin 16 kDa mRNA, complete cds	NA	coding protein	psRNATarget
EU943455.1	ncRNA:24   AAGGGAGGCAAAGAAAAAUAAUCA   1   **|||||||||||||||||||*|| targets:191   ACCCCUCCGUUUCUUUUUAUUUGU   214 Target Full Sequence	1.5	Zea mays clone 1624294 mRNA sequence	NA	coding protein	psRNATarget
HI403365.1	ncRNA:20   GAGGCAAAGAAAAAUAAUCA   1   |||||||||||||||||||| targets:1   CUCCGUUUCUUUUUAUUAGU   20 Target Full Sequence	0.0	Sequence 1490 from Patent EP2074227	NA	coding protein	psRNATarget
JB163826.1	ncRNA:20   GAGGCAAAGAAAAAUAAUCA   1   |||||||||||||||||||| targets:1   CUCCGUUUCUUUUUAUUAGU   20 Target Full Sequence	0.0	Sequence 1490 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235495.1	ncRNA:20   GAGGCAAAGAAAAAUAAUCA   1   |||||||||||||||||||| targets:1   CUCCGUUUCUUUUUAUUAGU   20 Target Full Sequence	0.0	Sequence 1490 from Patent EP2985353	NA	coding protein	psRNATarget
JB163834.1	ncRNA:20   GAGGCAAAGAAAAAUAAUCA   1   |||||||||||||||||||| targets:1   CUCCGUUUCUUUUUAUUAGU   20 Target Full Sequence	0.0	Sequence 1498 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235503.1	ncRNA:20   GAGGCAAAGAAAAAUAAUCA   1   |||||||||||||||||||| targets:1   CUCCGUUUCUUUUUAUUAGU   20 Target Full Sequence	0.0	Sequence 1498 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235504.1	ncRNA:20   GAGGCAAAGAAAAAUAAUCA   1   |||||||||||||||||||| targets:1   CUCCGUUUCUUUUUAUUAGU   20 Target Full Sequence	0.0	Sequence 1499 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235515.1	ncRNA:20   GAGGCAAAGAAAAAUAAUCA   1   |||||||||||||||||||| targets:1   CUCCGUUUCUUUUUAUUAGU   20 Target Full Sequence	0.0	Sequence 1510 from Patent EP2985353	NA	coding protein	psRNATarget
JB163846.1	ncRNA:20   GAGGCAAAGAAAAAUAAUCA   1   |||||||||||||||||||| targets:1   CUCCGUUUCUUUUUAUUAGU   20 Target Full Sequence	0.0	Sequence 1510 from Patent EP2559767	NA	coding protein	psRNATarget
HI403385.1	ncRNA:20   GAGGCAAAGAAAAAUAAUCA   1   |||||||||||||||||||| targets:1   CUCCGUUUCUUUUUAUUAGU   20 Target Full Sequence	0.0	Sequence 1510 from Patent EP2074227	NA	coding protein	psRNATarget
JB163835.1	ncRNA:20   GAGGCAAAGAAAAAUAAUCA   1   |||||||||||||||||||| targets:1   CUCCGUUUCUUUUUAUUAGU   20 Target Full Sequence	0.0	Sequence 1499 from Patent EP2559767	NA	coding protein	psRNATarget
HI403373.1	ncRNA:20   GAGGCAAAGAAAAAUAAUCA   1   |||||||||||||||||||| targets:1   CUCCGUUUCUUUUUAUUAGU   20 Target Full Sequence	0.0	Sequence 1498 from Patent EP2074227	NA	coding protein	psRNATarget
HI403367.1	ncRNA:20   GAGGCAAAGAAAAAUAAUCA   1   |||||||||||||||||||| targets:1   CUCCGUUUCUUUUUAUUAGU   20 Target Full Sequence	0.0	Sequence 1492 from Patent EP2074227	NA	coding protein	psRNATarget
HI403374.1	ncRNA:20   GAGGCAAAGAAAAAUAAUCA   1   |||||||||||||||||||| targets:1   CUCCGUUUCUUUUUAUUAGU   20 Target Full Sequence	0.0	Sequence 1499 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235497.1	ncRNA:20   GAGGCAAAGAAAAAUAAUCA   1   |||||||||||||||||||| targets:1   CUCCGUUUCUUUUUAUUAGU   20 Target Full Sequence	0.0	Sequence 1492 from Patent EP2985353	NA	coding protein	psRNATarget
JB163828.1	ncRNA:20   GAGGCAAAGAAAAAUAAUCA   1   |||||||||||||||||||| targets:1   CUCCGUUUCUUUUUAUUAGU   20 Target Full Sequence	0.0	Sequence 1492 from Patent EP2559767	NA	coding protein	psRNATarget