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BaseInfo

ncRNA ID novel_zma_miR1602
Species Zea mays
Class miRNA
Genome position Chr3:230464223-230464283 [-]
Reference genome RefGen_v4
Source SRR2089711
Length 24
Mature sequence(if miRNA) 1 - UAAAAAUAGGUUUACGAUCGUCAC - 24
Stem-loop(if miRNA) --    U   CAG  UU         -C   A
  GACG AUC   GA  CUAUUUUUA  GAU A
  |||| |||   ||  |||||||||  |||
  CUGC UAG   UU  GAUAAAAAU  CUG A
CA    -   -CA  UG         CA   C
Stem-loop sequence GACGUAUCCAGGAUUCUAUUUUUACGAUAAACGUCACUAAAAAUAGGUUUACGAUCGUCAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU944461.1
ncRNA:24   CACUGCUAGCAUUUGGAUAAAAAU   1
  *||=||=|||||||||||||||||
targets:767   CUGGCGGUCGUAAACCUAUUUUUA   790

1.0 Zea mays clone 219441 mRNA sequence NA coding protein psRNATarget