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BaseInfo

ncRNA ID novel_zma_miR1601
Species Zea mays
Class miRNA
Genome position Chr3:232154969-232155019 [-]
Reference genome RefGen_v4
Source SRR2089711
Length 23
Mature sequence(if miRNA) 1 - ACCGGACUGUUCGGUGCGCCAGA - 23
Stem-loop(if miRNA) --              CU        
  UGGUGCACCGGACA  GUCCGGUGG
  ||||||||||||||  ||||||||C
  ACCGCGUGGCUUGU  CAGGCCACA
AG              --        
Stem-loop sequence UGGUGCACCGGACACUGUCCGGUGGCACACCGGACUGUUCGGUGCGCCAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT068112.2
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  ||||||||||||=||||||||||
targets:375   UCUGGCGCACCGGACAGUCCGGU   397

1.5 Zea mays full-length cDNA clone ZM_BFb0045K13 mRNA, complete cds NA coding protein psRNATarget
BT068112.2
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  *=||||*|||||=||||||||||
targets:581   GUUGGCUCACCGGACAGUCCGGU   603

2.5 Zea mays full-length cDNA clone ZM_BFb0045K13 mRNA, complete cds NA coding protein psRNATarget
BT068112.2
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  ****||*|||||=||||||||||
targets:600   CGGUGCACACCGGACAGUCCGGU   622

2.5 Zea mays full-length cDNA clone ZM_BFb0045K13 mRNA, complete cds NA coding protein psRNATarget
BT068112.2
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  ****||*|||||=||||||||||
targets:470   CGGUGCACACCGGACAGUCCGGU   492

2.5 Zea mays full-length cDNA clone ZM_BFb0045K13 mRNA, complete cds NA coding protein psRNATarget
BT066811.2
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  ||||||||||||=||||||||||
targets:580   UCUGGCGCACCGGACAGUCCGGU   602

1.5 Zea mays full-length cDNA clone ZM_BFb0073A15 mRNA, complete cds NA coding protein psRNATarget
BT066811.2
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  ||*|||||||||=||||||||||
targets:484   UCGGGCGCACCGGACAGUCCGGU   506

1.5 Zea mays full-length cDNA clone ZM_BFb0073A15 mRNA, complete cds NA coding protein psRNATarget
BT066811.2
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  *=||||*|||||=||||||||||
targets:678   GUUGGCUCACCGGACAGUCCGGU   700

2.5 Zea mays full-length cDNA clone ZM_BFb0073A15 mRNA, complete cds NA coding protein psRNATarget
BT066811.2
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  ****||*|||||=||||||||||
targets:599   CGGUGCACACCGGACAGUCCGGU   621

2.5 Zea mays full-length cDNA clone ZM_BFb0073A15 mRNA, complete cds NA coding protein psRNATarget
BT066811.2
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  ****||*|||||=||||||||||
targets:697   CGGUGCACACCGGACAGUCCGGU   719

2.5 Zea mays full-length cDNA clone ZM_BFb0073A15 mRNA, complete cds NA coding protein psRNATarget
NM_001175949.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  ||||||||||||=||||||||||
targets:580   UCUGGCGCACCGGACAGUCCGGU   602

1.5 Zea mays uncharacterized LOC100383289 (LOC100383289), mRNA NA coding protein psRNATarget
NM_001175949.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  ||*|||||||||=||||||||||
targets:484   UCGGGCGCACCGGACAGUCCGGU   506

1.5 Zea mays uncharacterized LOC100383289 (LOC100383289), mRNA NA coding protein psRNATarget
NM_001175949.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  *=||||*|||||=||||||||||
targets:678   GUUGGCUCACCGGACAGUCCGGU   700

2.5 Zea mays uncharacterized LOC100383289 (LOC100383289), mRNA NA coding protein psRNATarget
NM_001175949.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  ****||*|||||=||||||||||
targets:599   CGGUGCACACCGGACAGUCCGGU   621

2.5 Zea mays uncharacterized LOC100383289 (LOC100383289), mRNA NA coding protein psRNATarget
NM_001175949.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  ****||*|||||=||||||||||
targets:697   CGGUGCACACCGGACAGUCCGGU   719

2.5 Zea mays uncharacterized LOC100383289 (LOC100383289), mRNA NA coding protein psRNATarget
BT066013.2
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  *|||||||||||=||||||||||
targets:779   CCUGGCGCACCGGACAGUCCGGU   801

1.5 Zea mays full-length cDNA clone ZM_BFb0155M15 mRNA, complete cds NA coding protein psRNATarget
BT066013.2
ncRNA:23   AG---ACCGCGUGGCUUGUCAGGCCA   1
  ||---||||||||||=||||||||||
targets:487   UCGAGUGGCGCACCGGACAGUCCGGU   512

1.5 Zea mays full-length cDNA clone ZM_BFb0155M15 mRNA, complete cds NA coding protein psRNATarget
NM_001175715.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  *|||||||||||=||||||||||
targets:779   CCUGGCGCACCGGACAGUCCGGU   801

1.5 Zea mays uncharacterized LOC100383038 (LOC100383038), mRNA NA coding protein psRNATarget
NM_001175715.1
ncRNA:23   AG---ACCGCGUGGCUUGUCAGGCCA   1
  ||---||||||||||=||||||||||
targets:487   UCGAGUGGCGCACCGGACAGUCCGGU   512

1.5 Zea mays uncharacterized LOC100383038 (LOC100383038), mRNA NA coding protein psRNATarget
BT065921.2
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  *|||||||||||=||||||||||
targets:504   CCUGGCGCACCGGACAGUCCGGU   526

1.5 Zea mays full-length cDNA clone ZM_BFc0044K19 mRNA, complete cds NA coding protein psRNATarget
BT065921.2
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  *=||||||||||=||||||||||
targets:600   GUUGGCGCACCGGACAGUCCGGU   622

1.5 Zea mays full-length cDNA clone ZM_BFc0044K19 mRNA, complete cds NA coding protein psRNATarget
BT065921.2
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  *=||||*|||||=||||||||||
targets:695   GUUGGCUCACCGGACAGUCCGGU   717

2.5 Zea mays full-length cDNA clone ZM_BFc0044K19 mRNA, complete cds NA coding protein psRNATarget
BT065921.2
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  ****||*|||||=||||||||||
targets:714   CGGUGCACACCGGACAGUCCGGU   736

2.5 Zea mays full-length cDNA clone ZM_BFc0044K19 mRNA, complete cds NA coding protein psRNATarget
NM_001175687.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  *|||||||||||=||||||||||
targets:504   CCUGGCGCACCGGACAGUCCGGU   526

1.5 Zea mays uncharacterized LOC100383005 (LOC100383005), mRNA NA coding protein psRNATarget
NM_001175687.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  *=||||||||||=||||||||||
targets:600   GUUGGCGCACCGGACAGUCCGGU   622

1.5 Zea mays uncharacterized LOC100383005 (LOC100383005), mRNA NA coding protein psRNATarget
NM_001175687.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  *=||||*|||||=||||||||||
targets:695   GUUGGCUCACCGGACAGUCCGGU   717

2.5 Zea mays uncharacterized LOC100383005 (LOC100383005), mRNA NA coding protein psRNATarget
NM_001175687.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  ****||*|||||=||||||||||
targets:714   CGGUGCACACCGGACAGUCCGGU   736

2.5 Zea mays uncharacterized LOC100383005 (LOC100383005), mRNA NA coding protein psRNATarget
EU940974.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  *|||||||||||=||||||||||
targets:2539   ACUGGCGCACCGGACAGUCCGGU   2561

1.5 Zea mays clone 1225259 mRNA sequence NA coding protein psRNATarget
EU940974.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  *=||||*|||||=||||||||||
targets:2750   GUUGGCUCACCGGACAGUCCGGU   2772

2.5 Zea mays clone 1225259 mRNA sequence NA coding protein psRNATarget
LQ241540.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  *||||=||||||=||||||||||
targets:92   CCUGGUGCACCGGACAGUCCGGU   114

2.5 Sequence 7535 from Patent EP2985353 NA coding protein psRNATarget
LQ241540.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  *|||||*|||||=||||||||||
targets:11   ACUGGCACACCGGACAGUCCGGU   33

2.5 Sequence 7535 from Patent EP2985353 NA coding protein psRNATarget
JB169871.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  *||||=||||||=||||||||||
targets:92   CCUGGUGCACCGGACAGUCCGGU   114

2.5 Sequence 7535 from Patent EP2559767 NA coding protein psRNATarget
JB169871.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  *|||||*|||||=||||||||||
targets:11   ACUGGCACACCGGACAGUCCGGU   33

2.5 Sequence 7535 from Patent EP2559767 NA coding protein psRNATarget
HI409410.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  *||||=||||||=||||||||||
targets:92   CCUGGUGCACCGGACAGUCCGGU   114

2.5 Sequence 7535 from Patent EP2074227 NA coding protein psRNATarget
HI409410.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  *|||||*|||||=||||||||||
targets:11   ACUGGCACACCGGACAGUCCGGU   33

2.5 Sequence 7535 from Patent EP2074227 NA coding protein psRNATarget
BT069074.2
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  *||||=||||||=||||||||||
targets:762   CCUGGUGCACCGGACAGUCCGGU   784

2.5 Zea mays full-length cDNA clone ZM_BFb0158J22 mRNA, complete cds NA coding protein psRNATarget
EZ066204.1
ncRNA:23   AG---ACCGCGUGGCUUGUCAGGCCA   1
  ||---||||||||||=||||||||||
targets:87   UCGCAUGGCGCACCGGACAGUCCGGU   112

1.5 TSA: Zea mays contig01838, mRNA sequence NA coding protein psRNATarget
NM_001165868.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  ||*|||||||||=||||||||||
targets:496   UCGGGCGCACCGGACAGUCCGGU   518

1.5 Zea mays uncharacterized LOC100304434 (LOC100304434), mRNA NA coding protein psRNATarget
NM_001165868.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  *=||||*|||||=||||||||||
targets:717   GUUGGCUCACCGGACAGUCCGGU   739

2.5 Zea mays uncharacterized LOC100304434 (LOC100304434), mRNA NA coding protein psRNATarget
NM_001165868.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  ****||*|||||=||||||||||
targets:622   CGGUGCACACCGGACAGUCCGGU   644

2.5 Zea mays uncharacterized LOC100304434 (LOC100304434), mRNA NA coding protein psRNATarget
NM_001165868.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  ****||*|||||=||||||||||
targets:736   CGGUGCACACCGGACAGUCCGGU   758

2.5 Zea mays uncharacterized LOC100304434 (LOC100304434), mRNA NA coding protein psRNATarget
NM_001165868.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  ****||*|||||=||||||||||
targets:839   CGGUGCACACCGGACAGUCCGGU   861

2.5 Zea mays uncharacterized LOC100304434 (LOC100304434), mRNA NA coding protein psRNATarget
BT061141.2
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  ||*|||||||||=||||||||||
targets:496   UCGGGCGCACCGGACAGUCCGGU   518

1.5 Zea mays full-length cDNA clone ZM_BFb0115B09 mRNA, complete cds NA coding protein psRNATarget
BT061141.2
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  *=||||*|||||=||||||||||
targets:717   GUUGGCUCACCGGACAGUCCGGU   739

2.5 Zea mays full-length cDNA clone ZM_BFb0115B09 mRNA, complete cds NA coding protein psRNATarget
BT061141.2
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  ****||*|||||=||||||||||
targets:622   CGGUGCACACCGGACAGUCCGGU   644

2.5 Zea mays full-length cDNA clone ZM_BFb0115B09 mRNA, complete cds NA coding protein psRNATarget
BT061141.2
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  ****||*|||||=||||||||||
targets:736   CGGUGCACACCGGACAGUCCGGU   758

2.5 Zea mays full-length cDNA clone ZM_BFb0115B09 mRNA, complete cds NA coding protein psRNATarget
BT061141.2
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  ****||*|||||=||||||||||
targets:839   CGGUGCACACCGGACAGUCCGGU   861

2.5 Zea mays full-length cDNA clone ZM_BFb0115B09 mRNA, complete cds NA coding protein psRNATarget
BT061709.2
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  *||||=||||||=||||||||||
targets:822   GCUGGUGCACCGGACAGUCCGGU   844

2.5 Zea mays full-length cDNA clone ZM_BFb0176K17 mRNA, complete cds NA coding protein psRNATarget
BT061709.2
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  *=*||=||||||=||||||||||
targets:588   AUGGGUGCACCGGACAGUCCGGU   610

2.5 Zea mays full-length cDNA clone ZM_BFb0176K17 mRNA, complete cds NA coding protein psRNATarget
NM_001174416.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  *||||=||||||=||||||||||
targets:822   GCUGGUGCACCGGACAGUCCGGU   844

2.5 Zea mays uncharacterized LOC100381596 (LOC100381596), mRNA NA coding protein psRNATarget
NM_001174416.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  *=*||=||||||=||||||||||
targets:588   AUGGGUGCACCGGACAGUCCGGU   610

2.5 Zea mays uncharacterized LOC100381596 (LOC100381596), mRNA NA coding protein psRNATarget
BT086229.2
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  *||||=||||||=||||||||||
targets:829   CCUGGUGCACCGGACAGUCCGGU   851

2.5 Zea mays full-length cDNA clone ZM_BFc0134M03 mRNA, complete cds NA coding protein psRNATarget
NM_001165861.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  *|*|||||||||=||||||||||
targets:331   ACGGGCGCACCGGACAGUCCGGU   353

1.5 Zea mays uncharacterized LOC100304427 (LOC100304427), mRNA NA coding protein psRNATarget
NM_001165861.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  *=||||*|||||=||||||||||
targets:542   GUUGGCUCACCGGACAGUCCGGU   564

2.5 Zea mays uncharacterized LOC100304427 (LOC100304427), mRNA NA coding protein psRNATarget
NM_001165861.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  ****||*|||||=||||||||||
targets:447   CGGUGCACACCGGACAGUCCGGU   469

2.5 Zea mays uncharacterized LOC100304427 (LOC100304427), mRNA NA coding protein psRNATarget
NM_001165861.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  ****||*|||||=||||||||||
targets:561   CGGUGCACACCGGACAGUCCGGU   583

2.5 Zea mays uncharacterized LOC100304427 (LOC100304427), mRNA NA coding protein psRNATarget
BT061124.2
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  *|*|||||||||=||||||||||
targets:331   ACGGGCGCACCGGACAGUCCGGU   353

1.5 Zea mays full-length cDNA clone ZM_BFb0108N24 mRNA, complete cds NA coding protein psRNATarget
BT061124.2
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  *=||||*|||||=||||||||||
targets:542   GUUGGCUCACCGGACAGUCCGGU   564

2.5 Zea mays full-length cDNA clone ZM_BFb0108N24 mRNA, complete cds NA coding protein psRNATarget
BT061124.2
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  ****||*|||||=||||||||||
targets:447   CGGUGCACACCGGACAGUCCGGU   469

2.5 Zea mays full-length cDNA clone ZM_BFb0108N24 mRNA, complete cds NA coding protein psRNATarget
BT061124.2
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  ****||*|||||=||||||||||
targets:561   CGGUGCACACCGGACAGUCCGGU   583

2.5 Zea mays full-length cDNA clone ZM_BFb0108N24 mRNA, complete cds NA coding protein psRNATarget
EZ065990.1
ncRNA:21   ACCGCGUGGCUUGUCAGGCCA   1
  ||||||||||=||||||||||
targets:1   UGGCGCACCGGACAGUCCGGU   21

1.5 TSA: Zea mays contig01624, mRNA sequence NA coding protein psRNATarget
BT083610.2
ncRNA:23   AG---ACCGCGUGGCUUGUCAGGCCA   1
  ||---||||||||||=||||||||||
targets:471   UCGCAUGGCGCACCGGACAGUCCGGU   496

1.5 Zea mays full-length cDNA clone ZM_BFb0019A02 mRNA, complete cds NA coding protein psRNATarget
BT083610.2
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  *|||||*|||||=||||||||||
targets:696   GCUGGCACACCGGACAGUCCGGU   718

2.5 Zea mays full-length cDNA clone ZM_BFb0019A02 mRNA, complete cds NA coding protein psRNATarget
BT083610.2
ncRNA:23   AG---ACCGCGUGGCUUGUCAGGCCA   1
  ||---||||*|||||=||||||||||
targets:795   UCCGGUGGCACACCGGACAGUCCGGU   820

2.5 Zea mays full-length cDNA clone ZM_BFb0019A02 mRNA, complete cds NA coding protein psRNATarget
EZ109126.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  **||||||||||=||||||||||
targets:174   GAUGGCGCACCGGACAGUCCGGU   196

1.5 TSA: Zea mays contig44785, mRNA sequence NA coding protein psRNATarget
XM_020546123.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  ||*|||||||||=||||||||||
targets:4378   UCGGGCGCACCGGACAGUCCGGU   4400

1.5 PREDICTED: Zea mays protein NUCLEAR FUSION DEFECTIVE 4-like (LOC103641819), mRNA NA coding protein psRNATarget
XM_020546123.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  ****||*|||||=||||||||||
targets:4494   CGGUGCACACCGGACAGUCCGGU   4516

2.5 PREDICTED: Zea mays protein NUCLEAR FUSION DEFECTIVE 4-like (LOC103641819), mRNA NA coding protein psRNATarget
BT066461.2
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  *=||||*|||||=||||||||||
targets:706   GUUGGCUCACCGGACAGUCCGGU   728

2.5 Zea mays full-length cDNA clone ZM_BFb0008E18 mRNA, complete cds NA coding protein psRNATarget
LQ242243.1
ncRNA:23   AG---ACCGCGUGGCUUGUCAGGCCA   1
  ||---|||=||||||=||||||||||
targets:145   UCGAGUGGUGCACCGGACAGUCCGGU   170

2.5 Sequence 8238 from Patent EP2985353 NA coding protein psRNATarget
JB170574.1
ncRNA:23   AG---ACCGCGUGGCUUGUCAGGCCA   1
  ||---|||=||||||=||||||||||
targets:145   UCGAGUGGUGCACCGGACAGUCCGGU   170

2.5 Sequence 8238 from Patent EP2559767 NA coding protein psRNATarget
HI410113.1
ncRNA:23   AG---ACCGCGUGGCUUGUCAGGCCA   1
  ||---|||=||||||=||||||||||
targets:145   UCGAGUGGUGCACCGGACAGUCCGGU   170

2.5 Sequence 8238 from Patent EP2074227 NA coding protein psRNATarget
BT065201.2
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  ||*||=||||||=||||||||||
targets:585   UCGGGUGCACCGGACAGUCCGGU   607

2.5 Zea mays full-length cDNA clone ZM_BFb0032D05 mRNA, complete cds NA coding protein psRNATarget
BT065201.2
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  *=||||*|||||=||||||||||
targets:723   GUUGGCACACCGGACAGUCCGGU   745

2.5 Zea mays full-length cDNA clone ZM_BFb0032D05 mRNA, complete cds NA coding protein psRNATarget
BT065201.2
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  ****||*|||||=||||||||||
targets:742   CGGUGCACACCGGACAGUCCGGU   764

2.5 Zea mays full-length cDNA clone ZM_BFb0032D05 mRNA, complete cds NA coding protein psRNATarget
BT061123.2
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  ||*||=||||||=||||||||||
targets:137   UCGGGUGCACCGGACAGUCCGGU   159

2.5 Zea mays full-length cDNA clone ZM_BFb0108I22 mRNA, complete cds NA coding protein psRNATarget
BT061123.2
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  ****||*|||||=||||||||||
targets:283   CGGUGCACACCGGACAGUCCGGU   305

2.5 Zea mays full-length cDNA clone ZM_BFb0108I22 mRNA, complete cds NA coding protein psRNATarget
EU940831.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  *=||||*|||||=||||||||||
targets:390   GUUGGCUCACCGGACAGUCCGGU   412

2.5 Zea mays clone 1157596 mRNA sequence NA coding protein psRNATarget
EU940831.1
ncRNA:23   AG---ACCGCGUGGCUUGUCAGGCCA   1
  ||---|||*||||||=||||||||||
targets:176   UCGGGUGGAGCACCGGACAGUCCGGU   201

2.5 Zea mays clone 1157596 mRNA sequence NA coding protein psRNATarget
EU940831.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  ****||*|||||=||||||||||
targets:295   CGGUGCACACCGGACAGUCCGGU   317

2.5 Zea mays clone 1157596 mRNA sequence NA coding protein psRNATarget
EU940831.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  ****||*|||||=||||||||||
targets:409   CGGUGCACACCGGACAGUCCGGU   431

2.5 Zea mays clone 1157596 mRNA sequence NA coding protein psRNATarget
EU940845.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  **||||*|||||=||||||||||
targets:1380   CGUGGCACACCGGACAGUCCGGU   1402

2.5 Zea mays clone 1163633 mRNA sequence NA coding protein psRNATarget
EU940845.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  ****||*|||||=||||||||||
targets:1399   CGGUGCACACCGGACAGUCCGGU   1421

2.5 Zea mays clone 1163633 mRNA sequence NA coding protein psRNATarget
BT068871.2
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  *=||||*|||||=||||||||||
targets:688   GUUGGCUCACCGGACAGUCCGGU   710

2.5 Zea mays full-length cDNA clone ZM_BFc0146G02 mRNA, complete cds NA coding protein psRNATarget
NM_001176621.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  *=||||*|||||=||||||||||
targets:688   GUUGGCUCACCGGACAGUCCGGU   710

2.5 Zea mays uncharacterized LOC100384010 (LOC100384010), mRNA NA coding protein psRNATarget
EZ108756.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  *=*|||||||||=||||||||||
targets:145   AUGGGCGCACCGGACAGUCCGGU   167

1.5 TSA: Zea mays contig44415, mRNA sequence NA coding protein psRNATarget
EZ106959.1
ncRNA:23   AGACCGCGUGGCUUGUCAGGCCA   1
  **||||*|||||=||||||||||
targets:95   GGUGGCACACCGGACAGUCCGGU   117

2.5 TSA: Zea mays contig42617, mRNA sequence NA coding protein psRNATarget
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