ncRNA ID | novel_zma_miR1593 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:202324351-202324422 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089711 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CAAAAACCGGAGAGGAUUGGAGGG - 24 |
Stem-loop(if miRNA) |
--       C    AG                  CA   CAAAAAC GGAG  GAUUGGAGGGGCUAAAAU  A   ||||||| ||||  ||||||||||||||||||  C   GUUUUUG UCUC  CUAAUUUCCCCGAUUUUA  U GU       -    CU                  UU |
Stem-loop sequence | CAAAAACCGGAGAGGAUUGGAGGGGCUAAAAUCAACUUUAUUUUAGCCCCUUUAAUCUCCUCUGUUUUUGUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008664337.2 |
|
3.0 | PREDICTED: Zea mays ABC transporter F family member 1 (LOC103640881), mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008654495.2 |
|
1.5 | PREDICTED: Zea mays probable GMP synthase [glutamine-hydrolyzing] (LOC103632764), mRNA | NA | coding protein | psRNATarget |