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BaseInfo

ncRNA ID	novel_zma_miR1584
Species	Zea mays
Class	miRNA
Genome position	Chr3:159137462-159137508 [+]
Reference genome	RefGen_v4
Source	SRR2089711
Length	23
Mature sequence(if miRNA)	25 - UGGUGGUGUGUAGUGGUGGAAGA - 47
Stem-loop(if miRNA)	--        AGA    -     A   UUUUACUA   ACAC CCACU A   ||||||||   |||| ||||| C   AAGGUGGU   UGUG GGUGG G AG        -GA    U     U
Stem-loop sequence	UUUUACUAAGAACACCCACUAACGUGGUGGUGUGUAGUGGUGGAAGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB163844.1	ncRNA:23   AGAAGGUGGUGAUGUGUGGUGGU   1   ||||||||||||||||||||||| targets:67   UCUUCCACCACUACACACCACCA   89 Target Full Sequence	0.0	Sequence 1508 from Patent EP2559767	NA	coding protein	psRNATarget
HI403383.1	ncRNA:23   AGAAGGUGGUGAUGUGUGGUGGU   1   ||||||||||||||||||||||| targets:67   UCUUCCACCACUACACACCACCA   89 Target Full Sequence	0.0	Sequence 1508 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235513.1	ncRNA:23   AGAAGGUGGUGAUGUGUGGUGGU   1   ||||||||||||||||||||||| targets:67   UCUUCCACCACUACACACCACCA   89 Target Full Sequence	0.0	Sequence 1508 from Patent EP2985353	NA	coding protein	psRNATarget
BT037068.1	ncRNA:23   AGAAGGUGGUGAUGUGUGGUGGU   1   *|||||||||||||||||||||| targets:964   GCUUCCACCACUACACACCACCA   986 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0153K19 mRNA, complete cds	NA	coding protein	psRNATarget
BT087938.1	ncRNA:23   AGAAGGUGGUGAUGUGUGGUGGU   1   *|||||||||||||||||||||| targets:929   GCUUCCACCACUACACACCACCA   951 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0319L01 mRNA, complete cds	NA	coding protein	psRNATarget
BT018927.1	ncRNA:23   AGAAGGUGGUGAUGUGUGGUGGU   1   *|||||||||||||||||||||| targets:1109   GCUUCCACCACUACACACCACCA   1131 Target Full Sequence	0.0	Zea mays clone Contig55.F mRNA sequence	NA	coding protein	psRNATarget
XM_008646350.2	ncRNA:23   AGAAGGUGGUGAUGUGUGGUGGU   1   *|||||||||||||||||||||| targets:1662   CCUUCCACCACUACACACCACCA   1684 Target Full Sequence	0.0	PREDICTED: Zea mays S-adenosyl-L-methionine-dependent methyltransferase superfamily protein (LOC103625944), mRNA	NA	coding protein	psRNATarget
XM_008679083.2	ncRNA:23   AGAAGGUGGUGAUGUGUGGUGGU   1   *|||||||||||||||||||||| targets:2077   GCUUCCACCACUACACACCACCA   2099 Target Full Sequence	0.0	PREDICTED: Zea mays prolyl carboxypeptidase like protein (LOC100283354), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008679080.2	ncRNA:23   AGAAGGUGGUGAUGUGUGGUGGU   1   *|||||||||||||||||||||| targets:2086   GCUUCCACCACUACACACCACCA   2108 Target Full Sequence	0.0	PREDICTED: Zea mays prolyl carboxypeptidase like protein (LOC100283354), transcript variant X1, mRNA	NA	coding protein	psRNATarget
LQ235514.1	ncRNA:23   AGAAGGUGGUGAUGUGUGGUGGU   1   *|||=|||||||||||||||||| targets:67   CCUUUCACCACUACACACCACCA   89 Target Full Sequence	1.0	Sequence 1509 from Patent EP2985353	NA	coding protein	psRNATarget
HI403384.1	ncRNA:23   AGAAGGUGGUGAUGUGUGGUGGU   1   *|||=|||||||||||||||||| targets:67   CCUUUCACCACUACACACCACCA   89 Target Full Sequence	1.0	Sequence 1509 from Patent EP2074227	NA	coding protein	psRNATarget
JB163845.1	ncRNA:23   AGAAGGUGGUGAUGUGUGGUGGU   1   *|||=|||||||||||||||||| targets:67   CCUUUCACCACUACACACCACCA   89 Target Full Sequence	1.0	Sequence 1509 from Patent EP2559767	NA	coding protein	psRNATarget
XM_008654898.2	ncRNA:23   AGAAGGUGGUGAUGUGUGGUGGU   1   *||||||||=|||||||=||||| targets:56   CCUUCCACCGCUACACAUCACCA   78 Target Full Sequence	2.5	PREDICTED: Zea mays anthocyanidin 3-O-glucosyltransferase 2 (LOC103633204), mRNA	NA	coding protein	psRNATarget