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BaseInfo

ncRNA ID novel_zma_miR1579
Species Zea mays
Class miRNA
Genome position Chr3:131074387-131074482 [+]
Reference genome RefGen_v4
Source SRR2089711
Length 24
Mature sequence(if miRNA) 73 - GUAAUGUCUCUGGCACUCGGCAAA - 96
Stem-loop(if miRNA) --               C   A    U  U        CAAG   U G
  UGCCGAGUGUCAGGG CAU ACAC CG CAAAGAAC    ACC G G
  ||||||||||||||| ||| |||| || ||||||||    ||| |
  ACGGCUCACGGUCUC GUA UGUG GC GUUUCUUG    UGG C C
AA               U   A    U  U        CAUA   C A
Stem-loop sequence UGCCGAGUGUCAGGGCCAUAACACUCGUCAAAGAACCAAGACCUGGGCACCGGUAUACGUUCUUUGUCGUGUGUAAUGUCUCUGGCACUCGGCAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ238769.1
ncRNA:24   AAACGGCUCACGGUCUCUGUAAUG   1
  ||||||||||||||*|||||||||
targets:172   UUUGCCGAGUGCCAUAGACAUUAC   195

1.5 Sequence 4764 from Patent EP2985353 NA coding protein psRNATarget
JB167100.1
ncRNA:24   AAACGGCUCACGGUCUCUGUAAUG   1
  ||||||||||||||*|||||||||
targets:172   UUUGCCGAGUGCCAUAGACAUUAC   195

1.5 Sequence 4764 from Patent EP2559767 NA coding protein psRNATarget
HI406639.1
ncRNA:24   AAACGGCUCACGGUCUCUGUAAUG   1
  ||||||||||||||*|||||||||
targets:172   UUUGCCGAGUGCCAUAGACAUUAC   195

1.5 Sequence 4764 from Patent EP2074227 NA coding protein psRNATarget