ncRNA ID | novel_zma_miR1578 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:128506519-128506581 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089711;SRR2089712 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUUGGCCUGUAGAGAGGUGGUGA - 24 |
Stem-loop(if miRNA) |
--AA      U      -          A   C     UUGGCC GUAGAG AGGUGGUGAC UGC G     |||||| |||||| |||||||||| |||     AAUUGG CAUCUC UUCGCUACUG AUG A GCUG      -      C          -   A |
Stem-loop sequence | AAUUGGCCUGUAGAGAGGUGGUGACAUGCCGAAGUAGUCAUCGCUUCCUCUACGGUUAAGUCG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001158715.1 |
|
2.0 | Zea mays myb-related protein Zm1 (LOC100285825), mRNA | NA | coding protein | psRNATarget | |||||||||
EU974179.1 |
|
2.0 | Zea mays clone 442099 myb-related protein Zm1 mRNA, complete cds | NA | coding protein | psRNATarget |