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BaseInfo

ncRNA ID novel_zma_miR1575
Species Zea mays
Class miRNA
Genome position Chr2:101488237-101488313 [+]
Reference genome RefGen_v4
Source SRR2089711;SRR2089699
Length 24
Mature sequence(if miRNA) 54 - GUUAAAGAGUAGAAUAGAGCAGAG - 77
Stem-loop(if miRNA) --CCA           -G      AAGUA        CCAC
     UUCUAUUCUGC  UUUGGC     GAACAGAG    U
     |||||||||||  ||||||     ||||||||
     GAGAUAAGAUG  AAAUUG     UUUGUUUU    C
GAGAC           AG      ----G        UUAC
Stem-loop sequence CCAUUCUAUUCUGCGUUUGGCAAGUAGAACAGAGCCACUCCAUUUUUUGUUUGGUUAAAGAGUAGAAUAGAGCAGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU945197.1
ncRNA:24   GAGACGAGAUAAGAUGAGAAAUUG   1
  |||*||||||||||||||||*|||
targets:105   CUCCGCUCUAUUCUACUCUUCAAC   128

1.5 Zea mays clone 244184 mRNA sequence NA coding protein psRNATarget
BT084215.2
ncRNA:24   GAGACGAGAUAAGAUGAGAAAUUG   1
  |||**|||||||||||||||*|||
targets:1037   CUCCACUCUAUUCUACUCUUCAAC   1060

1.5 Zea mays full-length cDNA clone ZM_BFb0090B20 mRNA, complete cds NA coding protein psRNATarget