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BaseInfo

ncRNA ID novel_zma_miR1571
Species Zea mays
Class miRNA
Genome position Chr2:63883482-63883551 [+]
Reference genome RefGen_v4
Source SRR2089711
Length 24
Mature sequence(if miRNA) 1 - AGACCAUAGCACUCGACAAAGAAG - 24
Stem-loop(if miRNA) --  A            A        GCAC   UGU
  AG CCAUAGCACUCG CAAAGAAG    ACC   G
  || |||||||||||| ||||||||    |||
  UC GGUAUCGUGAGC GUUUCUUC    UGG   A
GG  -            -        GAAA   CUA
Stem-loop sequence AGACCAUAGCACUCGACAAAGAAGGCACACCUGUGAAUCGGUAAAGCUUCUUUGCGAGUGCUAUGGCUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI407027.1
ncRNA:24   GAAGAAACAGCUCACGAUACCAGA   1
  *|||||||*|||||||||||||||
targets:54   GUUCUUUGCCGAGUGCUAUGGUCU   77

1.0 Sequence 5152 from Patent EP2074227 NA coding protein psRNATarget
JB167488.1
ncRNA:24   GAAGAAACAGCUCACGAUACCAGA   1
  *|||||||*|||||||||||||||
targets:54   GUUCUUUGCCGAGUGCUAUGGUCU   77

1.0 Sequence 5152 from Patent EP2559767 NA coding protein psRNATarget
LQ239157.1
ncRNA:24   GAAGAAACAGCUCACGAUACCAGA   1
  *|||||||*|||||||||||||||
targets:54   GUUCUUUGCCGAGUGCUAUGGUCU   77

1.0 Sequence 5152 from Patent EP2985353 NA coding protein psRNATarget