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BaseInfo

ncRNA ID novel_zma_miR1548
Species Zea mays
Class miRNA
Genome position Chr2:33324842-33324934 [+]
Reference genome RefGen_v4
Source SRR2089711;SRR2089706
Length 24
Mature sequence(if miRNA) 70 - UCUGUUGUGCUUAUGGGAAGGGAG - 93
Stem-loop(if miRNA) --   -C       -     AGA    --AAA A   CAGAGGCCCAACC
  CCC  CUCAUAA UACAG   AGAG     G GGC             C
  |||  ||||||| |||||   ||||     | |||
  GGG  GGGUAUU GUGUU   UCUC     G UGC             U
GA   AA       C     --G    AUUGU -   UCUGUGUACUAUA
Stem-loop sequence CCCCCUCAUAAUACAGAGAAGAGAAAGAGGCCAGAGGCCCAACCCUAUAUCAUGUGUCUCGUGUGUUACUCUGUUGUGCUUAUGGGAAGGGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU952095.1
ncRNA:24   GAGGGAAGGGUAUUCGUGUUGUCU   1
  ||||||||||||||||||=||||*
targets:1601   CUCCCUUCCCAUAAGCACGACAGU   1624

2.5 Zea mays clone 1164250 hypothetical protein mRNA, complete cds NA coding protein psRNATarget