Search result

BaseInfo

ncRNA ID	novel_zma_miR1547
Species	Zea mays
Class	miRNA
Genome position	Chr10:91846339-91846388 [-]
Reference genome	RefGen_v4
Source	SRR2089711;SRR2089712;SRR2089707
Length	23
Mature sequence(if miRNA)	1 - GGGCUUCGUGCCGGGCUCGUGGG - 23
Stem-loop(if miRNA)	-G -         -  CG     AA   C CGGGCUCGG AC  GGCCC  A   | ||||||||| ||  |||||  C   G GCUCGGGCC UG  UCGGG  A GG U         G  CU     CG
Stem-loop sequence	GCCGGGCUCGGACCGGGCCCAAACAGCGGGCUUCGUGCCGGGCUCGUGGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008671112.2	ncRNA:23   GGGUGCUCGGGCCGUGCUUCGGG   1   |=|=||||||||||||||||||| targets:1068   CUCGCGAGCCCGGCACGAAGCCC   1090 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC103646381 (LOC103646381), mRNA	NA	coding protein	psRNATarget
XM_020545884.1	ncRNA:23   GGGUGCUCGGGCCGUGCUUCGGG   1   |||=|||||||||||||||||*| targets:2747   CCCGCGAGCCCGGCACGAAGCAC   2769 Target Full Sequence	1.5	PREDICTED: Zea mays E3 ubiquitin-protein ligase PUB23 (LOC103642284), mRNA	NA	coding protein	psRNATarget
XM_008659605.1	ncRNA:23   GGGUGCUCGGGCCGUGCUUCGGG   1   |=|-||||*|||||=|||||||| targets:330   CUC-CGAGGCCGGCGCGAAGCCC   351 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103637404 (LOC103637404), mRNA	NA	coding protein	psRNATarget