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BaseInfo

ncRNA ID	novel_zma_miR1545
Species	Zea mays
Class	miRNA
Genome position	Chr2:135649638-135649699 [-]
Reference genome	RefGen_v4
Source	SRR2089711;SRR2089700
Length	24
Mature sequence(if miRNA)	39 - AUAGCACUCGGCAAAGAAGACACA - 62
Stem-loop(if miRNA)	--                    CACACC  A   AUAGCACUCGGCAAAGAAGA      UG G   ||||||||||||||||||||      || A   UGUCGUGAGCUGUUUCUUCU      AC A GA                    -AAAUA  C
Stem-loop sequence	AUAGCACUCGGCAAAGAAGACACACCUGAGAACCAAUAAAUCUUCUUUGUCGAGUGCUGUAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB167100.1	ncRNA:24   ACACAGAAGAAACGGCUCACGAUA   1   *|||-||||||||||||||||*|| targets:164   CGUG-CUUCUUUGCCGAGUGCCAU   186 Target Full Sequence	1.5	Sequence 4764 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238769.1	ncRNA:24   ACACAGAAGAAACGGCUCACGAUA   1   *|||-||||||||||||||||*|| targets:164   CGUG-CUUCUUUGCCGAGUGCCAU   186 Target Full Sequence	1.5	Sequence 4764 from Patent EP2985353	NA	coding protein	psRNATarget
HI406639.1	ncRNA:24   ACACAGAAGAAACGGCUCACGAUA   1   *|||-||||||||||||||||*|| targets:164   CGUG-CUUCUUUGCCGAGUGCCAU   186 Target Full Sequence	1.5	Sequence 4764 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238902.1	ncRNA:24   ACACAGAAGAAACGGCUCACGAUA   1   |*||*||||||||||||||*|||| targets:94   UCUGCCUUCUUUGCCGAGUACUAU   117 Target Full Sequence	1.5	Sequence 4897 from Patent EP2985353	NA	coding protein	psRNATarget
JB167233.1	ncRNA:24   ACACAGAAGAAACGGCUCACGAUA   1   |*||*||||||||||||||*|||| targets:94   UCUGCCUUCUUUGCCGAGUACUAU   117 Target Full Sequence	1.5	Sequence 4897 from Patent EP2559767	NA	coding protein	psRNATarget
HI406772.1	ncRNA:24   ACACAGAAGAAACGGCUCACGAUA   1   |*||*||||||||||||||*|||| targets:94   UCUGCCUUCUUUGCCGAGUACUAU   117 Target Full Sequence	1.5	Sequence 4897 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239197.1	ncRNA:24   ACACAGAAGAAACGGCUCACGAUA   1   *|**||*||||||||||||||||| targets:10   AGAUUCGUCUUUGCCGAGUGCUAU   33 Target Full Sequence	1.0	Sequence 5192 from Patent EP2985353	NA	coding protein	psRNATarget
JB167528.1	ncRNA:24   ACACAGAAGAAACGGCUCACGAUA   1   *|**||*||||||||||||||||| targets:10   AGAUUCGUCUUUGCCGAGUGCUAU   33 Target Full Sequence	1.0	Sequence 5192 from Patent EP2559767	NA	coding protein	psRNATarget
HI407067.1	ncRNA:24   ACACAGAAGAAACGGCUCACGAUA   1   *|**||*||||||||||||||||| targets:10   AGAUUCGUCUUUGCCGAGUGCUAU   33 Target Full Sequence	1.0	Sequence 5192 from Patent EP2074227	NA	coding protein	psRNATarget
HI408565.1	ncRNA:24   ACACAGAAGAAACGGCUCACGAUA   1   **|***||||||||||||||=||| targets:1   CUUAGGUUCUUUGCCGAGUGUUAU   24 Target Full Sequence	2.5	Sequence 6690 from Patent EP2074227	NA	coding protein	psRNATarget
JB169026.1	ncRNA:24   ACACAGAAGAAACGGCUCACGAUA   1   **|***||||||||||||||=||| targets:1   CUUAGGUUCUUUGCCGAGUGUUAU   24 Target Full Sequence	2.5	Sequence 6690 from Patent EP2559767	NA	coding protein	psRNATarget
LQ240695.1	ncRNA:24   ACACAGAAGAAACGGCUCACGAUA   1   **|***||||||||||||||=||| targets:1   CUUAGGUUCUUUGCCGAGUGUUAU   24 Target Full Sequence	2.5	Sequence 6690 from Patent EP2985353	NA	coding protein	psRNATarget
JB167204.1	ncRNA:24   ACACAGAAGAAACGGCUCACGAUA   1   |****|||||||*||||||||||| targets:40   UAAAGCUUCUUUACCGAGUGCUAU   63 Target Full Sequence	1.5	Sequence 4868 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238873.1	ncRNA:24   ACACAGAAGAAACGGCUCACGAUA   1   |****|||||||*||||||||||| targets:40   UAAAGCUUCUUUACCGAGUGCUAU   63 Target Full Sequence	1.5	Sequence 4868 from Patent EP2985353	NA	coding protein	psRNATarget
HI406743.1	ncRNA:24   ACACAGAAGAAACGGCUCACGAUA   1   |****|||||||*||||||||||| targets:40   UAAAGCUUCUUUACCGAGUGCUAU   63 Target Full Sequence	1.5	Sequence 4868 from Patent EP2074227	NA	coding protein	psRNATarget