ncRNA ID | novel_zma_miR1534 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:116673942-116674050 [+] |
Reference genome | RefGen_v4 |
Source | SRR1583944 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUGGCGAUCUGCGUUACUUAGCGC - 24 |
Stem-loop(if miRNA) |
--    C    ---U     ACUUAGCGCUAUGUUUGUUUCCUUUGUGUGUUUGCG   AUGG GAUC    GCGUU                                    U   |||| ||||    |||||                                    G   UACC UUAG    CACGA                                    U CC    -    UUUG     AUCGCGUUUGCCACUACGGGGCAUCCCUUAUUUGGA |
Stem-loop sequence | AUGGCGAUCUGCGUUACUUAGCGCUAUGUUUGUUUCCUUUGUGUGUUUGCGUGUAGGUUUAUUCCCUACGGGGCAUCACCGUUUGCGCUAAGCACGUUUGAUUCCAUCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ073456.1 |
|
0.0 | TSA: Zea mays contig09093, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EZ107072.1 |
|
2.5 | TSA: Zea mays contig42730, mRNA sequence | NA | coding protein | psRNATarget |