ncRNA ID | novel_zma_miR1532 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:188123823-188123895 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089710 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GGGCUCCUGUACCAGGUCGCGGAC - 24 |
Stem-loop(if miRNA) |
--  -    -   UAC    U       C     G CCU   GG GCUC CUG   CAGG CGCGGAC GUCCG C   G   || |||| |||   |||| ||||||| ||||| |   CC CGAG GAC   GUCC GCGCCUG CAGGC G   U CU  A    A   -CA    -       C     - CUG |
Stem-loop sequence | GGGCUCCUGUACCAGGUCGCGGACCGUCCGGCCCUGUGUCGCGGACCGUCCGCGCCUGACCAGAGAGCACCUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008666064.2 |
|
2.5 | PREDICTED: Zea mays expansin-B5 (LOC103642905), mRNA | NA | coding protein | psRNATarget | |||||||||
NM_001156821.2 |
|
2.5 | Zea mays beta-expansin 2 (LOC100283923), mRNA | NA | coding protein | psRNATarget | |||||||||
EU966422.1 |
|
2.5 | Zea mays clone 294390 beta-expansin 2 precursor, mRNA, complete cds | NA | coding protein | psRNATarget |