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BaseInfo

ncRNA ID novel_zma_miR1526
Species Zea mays
Class miRNA
Genome position Chr3:100220375-100220455 [+]
Reference genome RefGen_v4
Source SRR1583944
Length 24
Mature sequence(if miRNA) 1 - CCCGCCACUAGAAAUCGUAUUUCU - 24
Stem-loop(if miRNA) --C                 --    C            - U
   CCGCCACUAGAAAUCGU  AUUU UACAGGCGGUUU C U
   |||||||||||||||||  |||| |||||||||||| |
   GGCGGUGAUCUUUAGUA  UAAA AUGUCCGCUAAA G A
UUA                 CC    A            A A
Stem-loop sequence CCCGCCACUAGAAAUCGUAUUUCUACAGGCGGUUUCUUAAGAAAAUCGCCUGUAAAAAUCCAUGAUUUCUAGUGGCGGAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ235142.1
ncRNA:24   UCUUUAUGCUAAAGAUCACCGCCC   1
  |*|||*|=|||||||||||||||*
targets:1   AUAAAAAUGAUUUCUAGUGGCGGU   24

3.0 Sequence 1137 from Patent EP2985353 NA coding protein psRNATarget
HI403012.1
ncRNA:24   UCUUUAUGCUAAAGAUCACCGCCC   1
  |*|||*|=|||||||||||||||*
targets:1   AUAAAAAUGAUUUCUAGUGGCGGU   24

3.0 Sequence 1137 from Patent EP2074227 NA coding protein psRNATarget
JB163473.1
ncRNA:24   UCUUUAUGCUAAAGAUCACCGCCC   1
  |*|||*|=|||||||||||||||*
targets:1   AUAAAAAUGAUUUCUAGUGGCGGU   24

3.0 Sequence 1137 from Patent EP2559767 NA coding protein psRNATarget