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BaseInfo

ncRNA ID	novel_zma_miR1523
Species	Zea mays
Class	miRNA
Genome position	Chr2:152741144-152741297 [+]
Reference genome	RefGen_v4
Source	SRR2089710;SRR2089711;SRR2089712;SRR2089713;SRR2089714;SRR2089702;SRR2089708
Length	21
Mature sequence(if miRNA)	1 - ACAUUUUAAAUCUGGGACAUC - 21
Stem-loop(if miRNA)	--                  A  C    C     C     C    G       GAUU       ------------      A   ACAUUUUAAAUCUGGGAC UC AUCU ACAUC AGCGG AGCA UUAAUUU    AAGAACC            CCUCCC C   |||||||||||||||||| || |||| ||||| ||||| |||| |||||||    |||||||            |||||| C   UGUAAAAUUUAGAUCUUG AG UAGG UGUAG UUGUC UCGU GGUUGAA    UUCUUGG            GGAGGG A CG                  C  U    U     U     U    -       AUAU       AAUAAAGUGGAA      A
Stem-loop sequence	ACAUUUUAAAUCUGGGACAUCCAUCUCACAUCCAGCGGCAGCAGUUAAUUUGAUUAAGAACCCCUCCCACCAAGGGAGGAAGGUGAAAUAAGGUUCUUUAUAAAGUUGGUGCUUCUGUUUGAUGUUGGAUUGACGUUCUAGAUUUAAAAUGUGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008661794.2	ncRNA:21   CUACAGGGUCUAAAUUUUACA   1   |||||==|||||||||||||| targets:1052   GAUGUUUCAGAUUUAAAAUGU   1072 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103639018 (LOC103639018), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008661793.2	ncRNA:21   CUACAGGGUCUAAAUUUUACA   1   |||||==|||||||||||||| targets:1043   GAUGUUUCAGAUUUAAAAUGU   1063 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103639018 (LOC103639018), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008646380.2	ncRNA:21   CUACAGGGUCUAAAUUUUACA   1   *||||||=||||||||||||| targets:810   AAUGUCCUAGAUUUAAAAUGU   830 Target Full Sequence	1.0	PREDICTED: Zea mays E3 ubiquitin-protein ligase UPL7 (LOC103625986), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020537973.1	ncRNA:21   CUACAGGGUCUAAAUUUUACA   1   |||||=|||||||||||||*| targets:4   GAUGUUCCAGAUUUAAAAUAU   24 Target Full Sequence	2.5	PREDICTED: Zea mays mitochondrial import inner membrane translocase subunit TIM22-4-like (LOC109939669), mRNA	NA	coding protein	psRNATarget
XM_020553522.1	ncRNA:19   ACAGGGUCUAAAUUUUACA   1   |||=|=||||||||||||| targets:1   UGUUCUAGAUUUAAAAUGU   19 Target Full Sequence	2.0	PREDICTED: Zea mays MACPF domain-containing protein (LOC100383384), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008645476.2	ncRNA:21   CUACAGGGUCUAAAUUUUACA   1   *|||**||||||||||||||| targets:899   AAUGCACCAGAUUUAAAAUGU   919 Target Full Sequence	2.0	PREDICTED: Zea mays tic20-like protein (LOC100282929), transcript variant X1, mRNA	NA	coding protein	psRNATarget