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BaseInfo

ncRNA ID	novel_zma_miR1522
Species	Zea mays
Class	miRNA
Genome position	Chr2:147944328-147944422 [+]
Reference genome	RefGen_v4
Source	SRR2089710;SRR4237226;SRR4237227;SRR5451006
Length	20
Mature sequence(if miRNA)	76 - GGUCCCCAGCGGAGUCGCCA - 95
Stem-loop(if miRNA)	--AU   A       U   -A  -CUC   G     UUUU   C     AU     GAU UUGCUGG GGA  AC    AGA CUAUC    GAA CGGCC  U     ||| ||||||| |||  ||    ||| |||||    ||| |||||     CUG GGCGACC CCU  UG    UCU GAUAG    UUU GCCGG  G ACCG   A       -   GG  UAUA   G     ----   A     GA
Stem-loop sequence	AUGAUAUUGCUGGUGGAAACCUCAGAGCUAUCUUUUGAACCGGCCAUUGAGGGCCGAUUUGAUAGGUCUAUAUGUGGUCCCCAGCGGAGUCGCCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001196968.1	ncRNA:20   ACCGCUGAGGCGACCCCUGG   1   |||||||||||||||||||= targets:1428   UGGCGACUCCGCUGGGGACU   1447 Target Full Sequence	1.0	Zea mays uncharacterized LOC100502490 (LOC100502490), mRNA	NA	coding protein	psRNATarget
BT088349.1	ncRNA:20   ACCGCUGAGGCGACCCCUGG   1   |||||||||||||||||||= targets:1428   UGGCGACUCCGCUGGGGACU   1447 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0151F11 mRNA, complete cds	NA	coding protein	psRNATarget
BT086184.1	ncRNA:20   ACCGCUGAGGCGACCCCUGG   1   *||||*|||||||||||||= targets:86   AGGCGCCUCCGCUGGGGACU   105 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFc0127A10 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001176570.1	ncRNA:20   ACCGCUGAGGCGACCCCUGG   1   *||||*|||||||||||||= targets:93   AGGCGCCUCCGCUGGGGACU   112 Target Full Sequence	2.0	Zea mays uncharacterized LOC100383953 (LOC100383953), mRNA	NA	coding protein	psRNATarget
BT068714.1	ncRNA:20   ACCGCUGAGGCGACCCCUGG   1   *||||*|||||||||||||= targets:93   AGGCGCCUCCGCUGGGGACU   112 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0376H10 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020537464.1	ncRNA:20   ACCGCUGAGGCGACCCCUGG   1   *||||*|||||||||||||= targets:132   AGGCGCCUCCGCUGGGGACU   151 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC100383953 (LOC100383953), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_008645904.2	ncRNA:20   ACCGCUGAGGCGACCCCUGG   1   *||||*|||||||||||||= targets:113   AGGCGCCUCCGCUGGGGACU   132 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC100383953 (LOC100383953), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008645905.2	ncRNA:20   ACCGCUGAGGCGACCCCUGG   1   *||||*|||||||||||||= targets:132   AGGCGCCUCCGCUGGGGACU   151 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC100383953 (LOC100383953), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020537463.1	ncRNA:20   ACCGCUGAGGCGACCCCUGG   1   *||||*|||||||||||||= targets:132   AGGCGCCUCCGCUGGGGACU   151 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC100383953 (LOC100383953), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020537462.1	ncRNA:20   ACCGCUGAGGCGACCCCUGG   1   *||||*|||||||||||||= targets:132   AGGCGCCUCCGCUGGGGACU   151 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC100383953 (LOC100383953), transcript variant X1, mRNA	NA	coding protein	psRNATarget