ncRNA ID | osa-miR156l-3p |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr5:5230609-5230764 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 22 |
Mature sequence(if miRNA) | 127 - GCUCACUUCUCUUUCUGUCAGC - 148 |
Stem-loop(if miRNA) |
GCUAGGGA  C       -    -               UCU   CUU       U G  -----------           GAC         GC GACAGAA GAGA GUGAGCAUAUAUAGU   UUC   GCAUAUG G UC           AUAUGUGUGUU   U         || ||||||| |||| |||||||||||||||   |||   ||||||| | ||           |||||||||||   G         CG CUGUCUU CUCU CACUCGUGUAUAUCG   AAG   CGUGUAC U AG           UAUAUACAUAG   A CUAUUAAA  A       U    U               ---   -UU       U G  AGAGAGAGAUA           AGA |
Stem-loop sequence | GCUAGGGAGCCGACAGAAGAGAGUGAGCAUAUAUAGUUCUUUCCUUGCAUAUGUGGUCAUAUGUGUGUUGACUGAAGAGAUACAUAUAUAUAGAGAGAGAGAGUUCAUGUGCUUGAAGCUAUAUGUGCUCACUUCUCUUUCUGUCAGCAAAUUAUC |
1 | PMID:15200956
"Computational identification of plant microRNAs and their targets, including a stress-induced miRNA"; Jones-Rhoades MW, Bartel DP; Mol Cell. 14:787-799(2004). |
2 | PMID:21901091
"Viral infection induces expression of novel phased microRNAs from conserved cellular microRNA precursors"; Du P, Wu J, Zhang J, Zhao S, Zheng H, Gao G, Wei L, Li Y; PLoS Pathog. 7:e1002176(2011). |