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BaseInfo

ncRNA ID	novel_zma_miR1509
Species	Zea mays
Class	miRNA
Genome position	Chr1:66169775-66169822 [+]
Reference genome	RefGen_v4
Source	SRR2089710
Length	22
Mature sequence(if miRNA)	1 - GUGUACUGUUCACUGUCCGGUG - 22
Stem-loop(if miRNA)	---        UUC               GUGUACUG   ACUGUCCGGUGC    ||||||||   |||||||||||A    CACGUGGC   UGACAGGCCACC AGC        --C
Stem-loop sequence	GUGUACUGUUCACUGUCCGGUGCACCACCGGACAGUCCGGUGCACCGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT042818.1	ncRNA:22   GUGGCCUGUCACUUGUCAUGUG   1   ||||||||||||||||||=||= targets:730   CACCGGACAGUGAACAGUGCAU   751 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0047A15 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001196891.1	ncRNA:22   GUGGCCUGUCACUUGUCAUGUG   1   ||||||||||||||||||||*= targets:1282   CACCGGACAGUGAACAGUACCU   1303 Target Full Sequence	2.5	Zea mays uncharacterized LOC100502413 (LOC100502413), mRNA	NA	coding protein	psRNATarget
BT088050.1	ncRNA:22   GUGGCCUGUCACUUGUCAUGUG   1   ||||||||||||||||||||*= targets:1282   CACCGGACAGUGAACAGUACCU   1303 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0379I10 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001176828.1	ncRNA:22   GUGGCCUGUCACUUGUCAUGUG   1   |||||||||*|||||||||||= targets:841   CACCGGACAUUGAACAGUACAU   862 Target Full Sequence	2.5	Zea mays uncharacterized LOC100384263 (LOC100384263), mRNA	NA	coding protein	psRNATarget
BT069634.1	ncRNA:22   GUGGCCUGUCACUUGUCAUGUG   1   |||||||||*|||||||||||= targets:841   CACCGGACAUUGAACAGUACAU   862 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0193J19 mRNA, complete cds	NA	coding protein	psRNATarget