Search result

BaseInfo

ncRNA ID	novel_zma_miR1504
Species	Zea mays
Class	miRNA
Genome position	Chr10:106534346-106534548 [-]
Reference genome	RefGen_v4
Source	SRR1583944;SRR2647221;SRR2647343;SRR2647385;SRR2647386;SRR2647388;SRR2647389;SRR2647390;SRR2647467
Length	24
Mature sequence(if miRNA)	1 - ACCGUCCGUCCCUGUGCAGAGGGC - 24
Stem-loop(if miRNA)	--  -       C C      C     -  C U     G     C    --    ----  C    -----A  GAACCCGAGCUCCUGCACCAGGUCGCGGACCGUCC   CC CUGCGCA G GCGGAC GUCCG GC C AGGGC CGGAC GUCC  GGCC    GU AGGC      GG                                   G   || ||||||| | |||||| ||||| || | ||||| ||||| ||||  ||||    || ||||      ||   GG GACGUGU C UGCCUG CAGGC CG G UCCCG GCCUG CAGG  CCGG    CG UCCG      CG                                   G CG  A       C C      C     G  C -     -     C    CG    ACCA  C    CUGCCG  AGAGACCAGUCUGCGCCUGCCAGGCGCCGUGUCCC
Stem-loop sequence	CCCUGCGCACGCGCGGACCGUCCGGCCCUAGGGCGCGGACCGUCCGGCCGUCAGGCAGGGAACCCGAGCUCCUGCACCAGGUCGCGGACCGUCCGGCCCUGUGCCGCGGACCGUCCGCGUCUGACCAGAGAGCGCCGUCGCCUCGCACCAGGCCGCGGACCGUCCGGCCCUGCGCGCGGACCGUCCGUCCCUGUGCAGAGGGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU970066.1	ncRNA:24   CGGGAGACGUGUCCCUGCCUGCCA   1   |||||||||||||||=|||||||| targets:821   GCCCUCUGCACAGGGGCGGACGGU   844 Target Full Sequence	1.5	Zea mays clone 339328 mRNA sequence	NA	coding protein	psRNATarget
EU968855.1	ncRNA:24   CGGGAGACGUGUCCCUGCCUGCCA   1   |=||*|*||||||||*|||||||| targets:708   GUCCGCGGCACAGGGCCGGACGGU   731 Target Full Sequence	2.5	Zea mays clone 324570 mRNA sequence	NA	coding protein	psRNATarget