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BaseInfo

ncRNA ID novel_zma_miR1503
Species Zea mays
Class miRNA
Genome position Chr1:16307225-16307287 [-]
Reference genome RefGen_v4
Source SRR2089710;SRR2089706;SRR2089707
Length 24
Mature sequence(if miRNA) 40 - CAUAGCACUCGACAAAGAAGGCAC - 63
Stem-loop(if miRNA) --              AA      ACACCUAA
  CAUAGCACUCGACA  GAAGGC        G
  ||||||||||||||  ||||||        C
  GUGUUGUGAGCUGU  UUUCCG        A
CG              --      AAAUAGCC
Stem-loop sequence CAUAGCACUCGACAAAGAAGGCACACCUAAGCACCGAUAAAGCCUUUUGUCGAGUGUUGUGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ239197.1
ncRNA:24   CACGGAAGAAACAGCUCACGAUAC   1
  |**=|*||||||*|||||||||||
targets:11   GAUUCGUCUUUGCCGAGUGCUAUG   34

2.5 Sequence 5192 from Patent EP2985353 NA coding protein psRNATarget
JB167528.1
ncRNA:24   CACGGAAGAAACAGCUCACGAUAC   1
  |**=|*||||||*|||||||||||
targets:11   GAUUCGUCUUUGCCGAGUGCUAUG   34

2.5 Sequence 5192 from Patent EP2559767 NA coding protein psRNATarget
HI407067.1
ncRNA:24   CACGGAAGAAACAGCUCACGAUAC   1
  |**=|*||||||*|||||||||||
targets:11   GAUUCGUCUUUGCCGAGUGCUAUG   34

2.5 Sequence 5192 from Patent EP2074227 NA coding protein psRNATarget