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BaseInfo

ncRNA ID	novel_zma_miR1500
Species	Zea mays
Class	miRNA
Genome position	Chr1:37864482-37864617 [-]
Reference genome	RefGen_v4
Source	SRR2089710;SRR2287160;SRR2287161;SRR2287162;SRR2287163;SRR2287164;SRR2287165;SRR1997865;SRR5451003;SRR5451004;SRR5451005;SRR5451006;SRR1997866
Length	21
Mature sequence(if miRNA)	116 - UUUGACCAAGUUUGUAGAAAA - 136
Stem-loop(if miRNA)	--U                     A   UUUCCCAUAUA      UAA     C       -GC       GUUG    UUGACCAAGUUUGUAGAAAAA UGU           ACCAAU   AUACA UAUCAAG   AUUUCAU    G    ||||||||||||||||||||| |||           ||||||   ||||| |||||||   |||||||    GACUGGUUCAAAUAUCUUUUU ACA           UGGUUG   UAUGU GUAGUUU   UAAAGUA    A UUU                     -   -----------      -UA     U       AAU       GUUC
Stem-loop sequence	UUUGACCAAGUUUGUAGAAAAAAUGUUUUCCCAUAUAACCAAUUAAAUACACUAUCAAGGCAUUUCAUGUUGGACUUGAUGAAAUUAAUUUGAUGUUGUAUAUGUUGGUACAUUUUUCUAUAAACUUGGUCAGUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008646639.2	ncRNA:21   AAAAGAUGUUUGAACCAGUUU   1   |||||||=|||||||||||*| targets:2414   UUUUCUAUAAACUUGGUCAUA   2434 Target Full Sequence	2.5	PREDICTED: Zea mays pentatricopeptide repeat-containing protein At2g22410, mitochondrial (LOC103626239), mRNA	NA	coding protein	psRNATarget
BT035021.1	ncRNA:21   AAAAGAUGUUUGAACCAGUUU   1   ||||*||=||||||||||||| targets:169   UUUUGUAUAAACUUGGUCAAA   189 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0032F01 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001138099.1	ncRNA:21   AAAAGAUGUUUGAACCAGUUU   1   ||||*||=||||||||||||| targets:169   UUUUGUAUAAACUUGGUCAAA   189 Target Full Sequence	2.0	Zea mays uncharacterized LOC100192913 (LOC100192913), mRNA	NA	coding protein	psRNATarget
XM_008657170.2	ncRNA:21   AAAAGAUGUUUGAACCAGUUU   1   |||*||*=||||||||||||| targets:2192   UUUCCUUUAAACUUGGUCAAA   2212 Target Full Sequence	3.0	PREDICTED: Zea mays Leucine-rich repeat (LRR) family protein (LOC100502358), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008657171.2	ncRNA:21   AAAAGAUGUUUGAACCAGUUU   1   |||*||*=||||||||||||| targets:1978   UUUCCUUUAAACUUGGUCAAA   1998 Target Full Sequence	3.0	PREDICTED: Zea mays Leucine-rich repeat (LRR) family protein (LOC100502358), transcript variant X2, mRNA	NA	coding protein	psRNATarget