| ncRNA ID | osa-miR3981-5p |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr5:4302813-4302938 [+] |
| Reference genome | MSU7 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 24 - UGGGACGUAUCCUAUUACUAU - 44 |
| Stem-loop(if miRNA) |
A A A U UA - A GG GAAUAUA UA CUUAAAAUCG AUGGGACGUAUCCUA UACUA AGUCU GAUA GUCU A ||||||| || |||||||||| ||||||||||||||| ||||| ||||| |||| |||| U CUUAUAU GU GGAUUUUGGC UACUCUGCAUAGGAU AUGAU UUAGA CUGU CGGA A C G C U GC U A GU |
| Stem-loop sequence | GAAUAUAAUAACUUAAAAUCGAAUGGGACGUAUCCUAUUACUAUAAGUCUGAUAAGUCUGGAUAUGAGGCAUGUCUAGAUUCGUAGUAUUAGGAUACGUCUCAUCCGGUUUUAGGGUGCUAUAUUC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AK106348.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:002-101-H07, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| CT831562.1 |
|
2.5 | Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN032G14, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| AK288793.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J090070C08, full insert sequence | NA | coding protein | psRNATarget |
| 1 | PMID:21113019
"Identification and analysis of seven H(2)O(2)-responsive miRNAs and 32 new miRNAs in the seedlings of rice (Oryza sativa L. ssp. indica)"; Li T, Li H, Zhang YX, Liu JY; Nucleic Acids Res. 39:2821-2833(2011). |