ncRNA ID | novel_zma_miR1483 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:56302475-56302689 [+] |
Reference genome | RefGen_v4 |
Source | SRR1583944 |
Length | 24 |
Mature sequence(if miRNA) | 192 - AUGUCUAUCUCAAAUUCAUGGGGU - 215 |
Stem-loop(if miRNA) |
--                    U         A                               AC     AAG   G     --U   U    UCCAAUUCCUCUAAA   CCCAUGAAUUUGAGAUAGGC UAUAUGUGA CUUUGGAAAGUGGUGGAAUGUCAAAUUCUAA  UAAAU   UUA UUUAU   GAG GAAU               A   |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||  |||||   ||| |||||   ||| ||||   GGGUACUUAAACUCUAUCUG AUAUAUAUU GAAACCUUUCACCACCUUACAGUUUAAGGUU  GUUUA   GAU AAAUA   UUG CUCC               U UG                    U         C                               CC     CCU   G     UAA   -    GCAAACCUAGGGAAG |
Stem-loop sequence | CCCAUGAAUUUGAGAUAGGCUUAUAUGUGAACUUUGGAAAGUGGUGGAAUGUCAAAUUCUAAACUAAAUAAGUUAGUUUAUUGAGUGAAUUCCAAUUCCUCUAAAAUGAAGGGAUCCAAACGCCUCGUUAAUAUAAAGUAGUCCAUUUGCCUUGGAAUUUGACAUUCCACCACUUUCCAAAGCUUAUAUAUAUGUCUAUCUCAAAUUCAUGGGGU |