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BaseInfo

ncRNA ID	novel_zma_miR1472
Species	Zea mays
Class	miRNA
Genome position	Chr1:143967761-143967889 [-]
Reference genome	RefGen_v4
Source	SRR2089710
Length	25
Mature sequence(if miRNA)	1 - AAAUACGAUUUCUAGUGGCGGGUUU - 25
Stem-loop(if miRNA)	AAAA                            A                                   CCGCCACUAGAAAUCGUAUUUCUACAGG GGUUCCUUAAGAAAACCGCCAGUAGAAAUCC     |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||A     GGCGGUGAUCUUUAGCAUAAAGAUGUCC CCAAGGAAUUCUUUUGGCGGUCAUCUUUAGU UUUG                            G
Stem-loop sequence	AAAACCGCCACUAGAAAUCGUAUUUCUACAGGAGGUUCCUUAAGAAAACCGCCAGUAGAAAUCCAUGAUUUCUACUGGCGGUUUUCUUAAGGAACCGCCUGUAGAAAUACGAUUUCUAGUGGCGGGUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB166343.1	ncRNA:25   UUUGGGCGGUGAUCUUUAGCAUAAA   1   |||*||||||||||||||||||||| targets:37   AAAACCGCCACUAGAAAUCGUAUUU   61 Target Full Sequence	0.0	Sequence 4007 from Patent EP2559767	NA	coding protein	psRNATarget
HI405882.1	ncRNA:25   UUUGGGCGGUGAUCUUUAGCAUAAA   1   |||*||||||||||||||||||||| targets:37   AAAACCGCCACUAGAAAUCGUAUUU   61 Target Full Sequence	0.0	Sequence 4007 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238012.1	ncRNA:25   UUUGGGCGGUGAUCUUUAGCAUAAA   1   |||*||||||||||||||||||||| targets:37   AAAACCGCCACUAGAAAUCGUAUUU   61 Target Full Sequence	0.0	Sequence 4007 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235116.1	ncRNA:25   UUUGGGCGGUGAUCUUUAGCAUAAA   1   |||*||||||||||||||||||||| targets:15   AAAACCGCCACUAGAAAUCGUAUUU   39 Target Full Sequence	0.0	Sequence 1111 from Patent EP2985353	NA	coding protein	psRNATarget
HI402986.1	ncRNA:25   UUUGGGCGGUGAUCUUUAGCAUAAA   1   |||*||||||||||||||||||||| targets:15   AAAACCGCCACUAGAAAUCGUAUUU   39 Target Full Sequence	0.0	Sequence 1111 from Patent EP2074227	NA	coding protein	psRNATarget
JB163447.1	ncRNA:25   UUUGGGCGGUGAUCUUUAGCAUAAA   1   |||*||||||||||||||||||||| targets:15   AAAACCGCCACUAGAAAUCGUAUUU   39 Target Full Sequence	0.0	Sequence 1111 from Patent EP2559767	NA	coding protein	psRNATarget
HI402984.1	ncRNA:25   UUUGGGCGGUGAUCUUUAGCAUAAA   1   |||*|||=|||||||||||*||||| targets:15   AAAACCGUCACUAGAAAUCAUAUUU   39 Target Full Sequence	2.5	Sequence 1109 from Patent EP2074227	NA	coding protein	psRNATarget
JB163445.1	ncRNA:25   UUUGGGCGGUGAUCUUUAGCAUAAA   1   |||*|||=|||||||||||*||||| targets:15   AAAACCGUCACUAGAAAUCAUAUUU   39 Target Full Sequence	2.5	Sequence 1109 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235114.1	ncRNA:25   UUUGGGCGGUGAUCUUUAGCAUAAA   1   |||*|||=|||||||||||*||||| targets:15   AAAACCGUCACUAGAAAUCAUAUUU   39 Target Full Sequence	2.5	Sequence 1109 from Patent EP2985353	NA	coding protein	psRNATarget