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BaseInfo

ncRNA ID novel_zma_miR1461
Species Zea mays
Class miRNA
Genome position Chr2:18403629-18403690 [-]
Reference genome RefGen_v4
Source SRR1583944
Length 24
Mature sequence(if miRNA) 39 - GUGGCUGGCACAUCGGACAGUGUC - 62
Stem-loop(if miRNA) --  G -C                G CC    
  GU G  UGGCACAUCGGACAGU U  GGUGG
  || |  |||||||||||||||| |  ||||C
  CA C  ACCGUGUGGCCUGUCA A  CCACG
AA  G AU                G --    
Stem-loop sequence GUGGCUGGCACAUCGGACAGUGUCCGGUGGCGCACCAGACUGUCCGGUGUGCCAUACGACAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU950973.1
ncRNA:23   UGUGACAGGCUACACGGUCGGUG   1
  |*|=||||=|=||||||||||||
targets:1   AGAUUGUCUGGUGUGCCAGCCAC   23

2.5 Zea mays clone 677173 mRNA sequence NA coding protein psRNATarget