| ncRNA ID | osa-miR426 |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr5:174006-174153 [+] |
| Reference genome | MSU7 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 7 - UUUUGGAAGUUUGUCCUUACG - 27 |
| Stem-loop(if miRNA) |
UUUG UU GUCC AG CAAAA AGGCAAUGAAUGAAAAGACAUCUAGCGAU UCGCAUU GAAG U UUACGAAA GCUAG UUUAGUG A ||||||| |||| | |||||||| ||||| ||||||| AGCGUAA CUUC A AGUGCUUU CGGUU AAACUGU C ---- CU --AA -A ---UC GUAAAAUCCCAAUAGUUUAAAAUUAAAAU |
| Stem-loop sequence | UCGCAUUUUUGGAAGUUUGUCCUUACGAAAAGGCUAGCAAAAUUUAGUGAGGCAAUGAAUGAAAAGACAUCUAGCGAUACUAAAAUUAAAAUUUGAUAACCCUAAAAUGUGUCAAACUUUGGCAUUUCGUGAAAAUCCUUCAAUGCGA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AK102273.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J033089B20, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| XM_015792927.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group geranylgeranyl transferase type-2 subunit beta (LOC4346013), mRNA | geranylgeranyl transferase type-2 subunit beta(LOC4346013) | coding protein | psRNATarget |
| 1 | PMID:15345049
"Prediction and identification of Arabidopsis thaliana microRNAs and their mRNA targets"; Wang XJ, Reyes JL, Chua NH, Gaasterland T; Genome Biol. 5:R65(2004). |
| 2 | PMID:16669754
"MicroRNAS and their regulatory roles in plants"; Jones-Rhoades MW, Bartel DP, Bartel B; Annu Rev Plant Biol. 57:19-53(2006). |