ncRNA ID | novel_zma_miR1436 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:302046950-302047141 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089710;SRR5451004;SRR5451005;SRR2089700;SRR2089708 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAGCGAUUCUUAUAGAAGCUGGCU - 24 |
Stem-loop(if miRNA) |
--         C        UG   ---G      GA   UG -  -AU   G  U    UGC   GGAA A   A  G   CAAAG   UA       GAA   CCAGCUUUU UGAGAAUC  GCU    UGGGGA  AUU  A GU   CGU GA UACA   GAA    G UGA GU GUC     GGU  GAAUCUA   A   ||||||||| ||||||||  |||    ||||||  |||  | ||   ||| || ||||   |||    | ||| || |||     |||  |||||||   GGUCGAAGA AUUCUUAG  CGA    AUUUUU  UAG  U CA   GUA UU AUGU   CUU    C GCU CA CAG     UCA  CUUAGGU   G UC         U        --   AAGA      GG   GU U  GUU   A  U    ---   -AAC A   -  G   UGCUA   UC       AGC |
Stem-loop sequence | CCAGCUUUUCUGAGAAUCUGGCUGUGGGGAGAAUUUGAGUAUCGUGGAUUACAUGCGAAGGAAGAUGAAGUGGUCCAAAGGGUUAGAAUCUAGAAAGCGAUGGAUUCCUACUAUCGUGACGACUCGACCAAUUCUGUAUUUAAUGUUGACUUUGGAUGGUUUUUAAGAAAGCGAUUCUUAUAGAAGCUGGCU |