Search result

BaseInfo

ncRNA ID osa-miR393b-3p
Species Oryza sativa
Class miRNA
Genome position Chr4:34931876-34932007 [-]
Reference genome MSU7
Source miRBase
Length 21
Mature sequence(if miRNA) 10 - UCAGUGCAAUCCCUUUGGAAU - 30
Stem-loop(if miRNA) UCGGCCUG - GAAACUAGUGGAGGACUCCAAAGGGAUCGCAUUGAUCUGGCUAGCUAUCUCGAUCGA
        A G                                                         U
        | |                                                         C
        C C                                                         G
------UU U CUUUUAAGGUUUCCCUAACGUGACUAGCUAGUGCGUGCAGCAGCAGCUAGCUACUCC
Stem-loop sequence UCGGCCUGAGGAAACUAGUGGAGGACUCCAAAGGGAUCGCAUUGAUCUGGCUAGCUAUCUCGAUCGAUCGCCUCAUCGAUCGACGACGACGUGCGUGAUCGAUCAGUGCAAUCCCUUUGGAAUUUUCCUCUU

Reference

1 PMID:15258262
"Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis";
Sunkar R, Zhu JK;
Plant Cell. 16:2001-2019(2004).
2 PMID:19903869
"Rice MicroRNA effector complexes and targets";
Wu L, Zhang Q, Zhou H, Ni F, Wu X, Qi Y;
Plant Cell. 21:3421-3435(2009).